Arthrobacter citreus: HPK19_13280
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Entry
HPK19_13280 CDS
T06606
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
acit
Arthrobacter citreus
Pathway
acit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPK19_13280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acit03000
]
HPK19_13280
Transcription factors [BR:
acit03000
]
Prokaryotic type
Helix-turn-helix
Other families
HPK19_13280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_2
TPR_1
TPR_8
TPR_12
HTH_19
TPR_10
HTH_31
SPO22
TPR_7
TPR_16
TPR_3
Motif
Other DBs
NCBI-ProteinID:
QKE73719
LinkDB
All DBs
Position
complement(2739429..2740685)
Genome browser
AA seq
418 aa
AA seq
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MLVGEIIKYYREKKGISQSKLGEGICGKAYISRFESGKVTLSPEIIYKLANKLEIDINKE
IESLYLIEKHLNDWNQAIIMQRTAQIEGIKLELEKNPFIMASKHAANYTLLTGRYYLHKN
MFKEAKSIIENVEKEFPTLSNYEKNLLLHIKGMYCISTFRTIECEECQIAVNLLKQINLA
EYNNEEYYFHLALAYHYANAKVSAFNYAEKALQFFNKTYNHVNAMNAQILMLMQFDSERD
IDFLELVENYKNLIHNCMILGAQESKINILYNLGEELYKKGKYDQAVSYFEEAFLLTDKS
SIKYLRRLYHFTEACLDGKLLKKENILEKIDAGLKLAKKQCPIYLNLYKLLALKCKKNLS
QYYQFLADVVVPQFIATNNTSFFKQYGKTLYNYYVEKEEYEKAIEVDQHFKLMTQVLN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttagttggggaaatcatcaagtattatcgagagaaaaaagggatcagtcaatctaaa
ttgggtgaaggtatttgtggtaaagcgtatattagtaggtttgaaagtggaaaagttaca
ttatctcctgaaattatatacaaattagccaataaattagaaattgatattaataaagaa
attgaatctttatatcttattgaaaagcacttgaatgattggaatcaggcaatcataatg
caaagaacagcacaaattgaaggcattaaattggaattagaaaaaaacccgtttattatg
gcctctaaacatgctgcaaactatacgcttttaacggggagatattatcttcacaaaaat
atgtttaaagaagcaaaaagcataattgaaaacgtggaaaaagagtttccgaccttatca
aattatgaaaaaaatcttcttctccacattaaaggaatgtattgtattagtacttttaga
acgattgaatgtgaagaatgtcaaattgctgtgaatcttttaaaacaaattaacttagcg
gaatataataatgaagaatattacttccacctagcacttgcgtatcactatgcaaatgca
aaggtatctgcatttaattatgccgagaaagcactgcaattttttaataaaacatataat
catgtgaatgctatgaatgctcaaatcttgatgctaatgcaattcgatagtgaaagagat
attgattttttagagttagtcgaaaattataagaatctgatccataattgtatgatttta
ggtgctcaagaaagtaaaataaatattttatataatctaggagaagagttatacaaaaaa
gggaaatatgatcaagctgttagttattttgaagaagcatttttactaactgataaatcg
tcaataaagtatttaaggcgattgtatcattttactgaagcatgtttagatggaaagtta
ttaaaaaaagaaaacattttagaaaaaatagacgcaggtttgaaattagcaaagaaacaa
tgcccaatatatctcaatctttataaactgttagccttgaaatgtaaaaaaaatctaagc
caatattatcaatttttagctgacgtagtcgtaccacagtttattgcgacaaataatact
tcattttttaagcaatatggaaagaccttatacaattattatgtcgagaaagaagaatat
gagaaagcaattgaagtagatcaacactttaaattgatgactcaagtgttaaattaa
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