Arthrobacter citreus: HPK19_13935
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Entry
HPK19_13935 CDS
T06606
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
acit
Arthrobacter citreus
Pathway
acit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPK19_13935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acit03000
]
HPK19_13935
Transcription factors [BR:
acit03000
]
Prokaryotic type
Helix-turn-helix
Other families
HPK19_13935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_12
TPR_1
HTH_31
TPR_2
DUF7083
TPR_10
CEP162_C
YkzI
Motif
Other DBs
NCBI-ProteinID:
QKE73842
LinkDB
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Position
complement(2893629..2894888)
Genome browser
AA seq
419 aa
AA seq
DB search
MIEGEIIKFYREKMGLTQAMLGEGICTTTHVSKIERGKTAYSPDIIALFSDRLGININHE
VQSFYNLEKKLHLWHDALIMKKEAQIEECKAELDQMPFIEYSQYAAHYNLLRARYYFHYQ
NLDMVKQILTYVTKEFPELSPFEKNLFYHLQGMFYISNYTSLSSEDHQKAIKVLKMINID
EYRNEEYYHHLAIAYHYGSSKILAYKYAEMALKYFQRTNNYLFAISSETLMLLQYGSELE
MNFNEVVGRYKDLIHNCEVLGDRERKAILLNNLGVKYFKREEYETALYYFEESINETENK
KSINYLRRLCNYLETCTEGTLLEKEILLGVMKRALALAKLLKSPVHITLIKLFKLKAEGA
REKFYQYLSDEALPFFYSTNNKFYIEQFGKKLYKYYIEIKDFQKAAELYESIEHTFVSL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgattgagggggaaatcataaagttttatcgtgaaaaaatggggttaactcaagctatg
cttggagaaggtatatgtacaactactcatgttagtaaaattgaaagaggcaagacggca
tactcacctgatattatcgctttattttcagatcgtttaggaataaatattaatcatgaa
gtccaatcgttttataatttagagaaaaaattacatctttggcatgatgcattaataatg
aaaaaagaagcacaaatagaagaatgtaaagcagaacttgatcaaatgccctttattgaa
tattcacaatacgcagcccactataatttactaagagcaaggtattattttcattatcaa
aatttagatatggttaagcaaatacttacatatgtgacaaaagaattccctgaattatct
cctttcgagaaaaatctattttatcatcttcaaggtatgttttatatatcaaattatact
agcctaagtagtgaagaccatcaaaaagcaattaaagtattaaagatgattaatatcgat
gagtatcgaaatgaagaatactatcatcatcttgcaattgcctatcattatggaagctca
aaaatattggcttataaatatgctgaaatggctcttaaatattttcagagaacgaataat
tacttatttgcgattagttctgaaacgcttatgttattgcagtacggtagtgagttagag
atgaattttaatgaagttgtaggacgctacaaggatttaattcataactgtgaagtatta
ggggaccgagaacgtaaggctatattattaaataatcttggcgttaagtattttaagcga
gaagaatatgaaactgcattatattattttgaagaaagtattaatgaaaccgaaaataaa
aaatccatcaattatttaagacgtttgtgcaattatttagagacatgtactgaagggaca
ttattagaaaaagagatacttcttggtgtgatgaaaagagcacttgcactagcaaaattg
ttaaaaagcccagtacatattacccttattaaattatttaagctgaaggctgagggtgct
cgagaaaagttttatcaatatctatcggatgaggcacttccattcttttattctactaat
aataaattctatatcgaacaatttggtaagaaattatataaatactatatagaaattaaa
gattttcaaaaagctgctgaattatatgaatcaattgaacatacatttgttagcttataa
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