Arthrobacter citreus: HPK19_15650
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Entry
HPK19_15650 CDS
T06606
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
acit
Arthrobacter citreus
Pathway
acit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPK19_15650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acit03000
]
HPK19_15650
Transcription factors [BR:
acit03000
]
Prokaryotic type
Helix-turn-helix
Other families
HPK19_15650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_2
TPR_12
HTH_19
TPR_10
ALKBH10B_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QKE74135
LinkDB
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Position
3274993..3276213
Genome browser
AA seq
406 aa
AA seq
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MYEGKIIKFYREKYKLTQEQLGKNICSVTHISKIECAQTKYAPEIINLLSNRLGIDMELE
VTNFMNIKQRLLHWHDVIIMQLFEEMDQIYYEFEMEELIQISEYNDMYQLLRAKYFLVYN
KCNEAFKIIKKIQKKEDKLAQYERNLLKHILGIYYLAKQEYSKVIQILKSIDNTVYKNPE
YNYHLASAYHTLSAPVLAYYYAEKSRHFFKQINNYLRVIDAEMLMIIQVQGDTLDEEIIN
RFKNLIRSCELCNAPERKAKVLHNLAYELYRGKHYKDASKYYKESMSLKDSESASYLLSL
EGYIRSSFDGGSSNIEELIHGTDSGLLIAKKNNYTLYIHLFKLLLYLLKSKEKEYHIYLN
NKALPMFIKNGFTFLVERSKKELFNYYKKMNLNEQAMEIAQLIVNA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaggaaaaataattaagttttatcgagaaaaatacaaactaacgcaagaacag
cttggaaaaaacatttgctccgttacccatataagtaaaatagaatgtgcgcaaactaaa
tatgcgcccgaaataataaatttattatcaaacagacttggtattgatatggaattagaa
gtaactaattttatgaatataaaacaacgattacttcactggcatgacgtgatcatcatg
cagttatttgaagagatggatcaaatctattatgaatttgaaatggaagaattaattcaa
atctcagaatataatgatatgtatcagttgctaagagctaaatattttcttgtgtataat
aaatgtaatgaagcatttaaaatcatcaaaaagattcaaaaaaaggaagataaattagca
caatatgaacgaaatttattaaagcatattttaggaatttattatttagcaaaacaagaa
tatagtaaagtaatccaaattttaaaatcgattgataatacagtttataaaaaccctgaa
tataattaccatttagcatcggcttatcatactttaagtgctcctgtattagcctattat
tatgctgaaaaatctcgtcattttttcaaacaaatcaataactatcttagagtgattgac
gctgaaatgctgatgattatacaagttcaaggtgacacattagatgaagaaattattaat
cgttttaaaaatttaattagaagctgcgagctgtgcaatgcacctgagcgaaaagcaaaa
gtactgcataacttagcttatgaattatatagaggtaaacattataaagatgctagtaaa
tactacaaagaatcgatgtcactgaaggattccgaatccgcgtcatatttactttcatta
gaaggttatattcgaagttcatttgatggtggttcatccaatatagaagagcttattcat
ggcacagactctggactacttatagcgaagaagaataactatactttatatatacactta
tttaaacttttactttatttattaaagtctaaggaaaaagaatatcatatctaccttaat
aataaagctttaccaatgtttataaaaaatggcttcacatttttagtggagcgctcgaaa
aaggaattatttaattattataaaaagatgaatttaaatgaacaggcaatggaaattgcg
caattaattgtgaatgcttag
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