Arthrobacter citreus: HPK19_18070
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Entry
HPK19_18070 CDS
T06606
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
acit
Arthrobacter citreus
Pathway
acit03030
DNA replication
acit03430
Mismatch repair
acit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPK19_18070 (holB)
03430 Mismatch repair
HPK19_18070 (holB)
03440 Homologous recombination
HPK19_18070 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acit03032
]
HPK19_18070 (holB)
03400 DNA repair and recombination proteins [BR:
acit03400
]
HPK19_18070 (holB)
Enzymes [BR:
acit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPK19_18070 (holB)
DNA replication proteins [BR:
acit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPK19_18070 (holB)
DNA repair and recombination proteins [BR:
acit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPK19_18070 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DUF5074
DNApol3-delta_C
CTD5
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKE74561
LinkDB
All DBs
Position
3809781..3810776
Genome browser
AA seq
331 aa
AA seq
DB search
MSTSWEELAERQPVATKMLKNAVIKNRVAHAYLFEGPRGTGKRELALYYTKVLLCENVSD
ATPCGTCRNCKRVDSGNHPNVYLIEPEETSIKKHQIQQLQEEFSKTAVESNRKIYIIDHA
DRMTTNAANSLLKFLEEPVSITTAFLLTEQVQQILPTIQSRCQSIHFNPLPTKYFEEHLT
KIELQSNLIPLLARITNSETEAVQIVEEEWFAQARDLVIELYEALLTTKKDSLLIIQQNV
TRHFNTKEQLQMVLDMLVLAFKDMLYIYAEQDQNVVFKNEESLMRQAINRISLEKITTCL
EIILDAKKRLTSNANMLMVLEQMTIELQEGL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatcttgggaggaattagccgagcgtcagccagttgctacaaaaatgttaaaa
aatgctgttattaagaacagagtggctcatgcttacttatttgagggcccaagaggaact
ggcaaacgagaacttgcattatattacacaaaagtattactatgtgagaatgtaagtgac
gctacaccttgtggaacttgtcgtaattgtaagcgtgtcgattccggtaatcacccgaat
gtttacttaatcgaacccgaggaaacctctataaaaaaacatcaaattcaacaactacaa
gaggaattctctaaaactgctgttgaatcgaatcgaaaaatttatataatagaccacgct
gatcgaatgactacgaatgcagcaaattcattattaaaatttttagaggagcctgtttca
attacaaccgcgtttttattaactgagcaagtacaacaaattttgccaacaatacaatct
agatgccaatcaattcattttaatccactgccaacaaagtattttgaggaacatttaaca
aaaatagaactacaatcaaatttaatccctttattagcaagaatcacaaacagtgaaact
gaggcagttcaaattgttgaagaagaatggtttgcacaagctagagatttagtgatagaa
ttatatgaagcattattaacgacgaaaaaagatagtcttttgattatacaacaaaatgtg
actcgtcatttcaatacgaaggaacagttacaaatggtgcttgatatgcttgtattagcc
tttaaagatatgctatatatatatgctgaacaagatcaaaacgttgtttttaaaaatgaa
gaatcattaatgagacaagcaataaaccgcatttcattagagaaaataactacttgttta
gagatcattcttgatgctaaaaaacgactaacatcaaacgcaaatatgttaatggtttta
gagcaaatgactatagagctacaggagggattgtag
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