Arthrobacter citreus: HPK19_19035
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Entry
HPK19_19035 CDS
T06606
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acit
Arthrobacter citreus
Pathway
acit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPK19_19035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acit03019
]
HPK19_19035
03009 Ribosome biogenesis [BR:
acit03009
]
HPK19_19035
Enzymes [BR:
acit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPK19_19035
Messenger RNA biogenesis [BR:
acit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPK19_19035
Ribosome biogenesis [BR:
acit03009
]
Prokaryotic type
rRNA helicases
HPK19_19035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QKE74716
LinkDB
All DBs
Position
3979039..3980589
Genome browser
AA seq
516 aa
AA seq
DB search
MTTFQELGLSSKILFAIEKLGFEEATPIQAQTIPLAKQGHDVIGQAQTGTGKTAAFGIPL
LEKIDVDSSNVQGLVIAPTRELAIQVGEELHKIGMNKGVKILPIYGGQDINRQMRSLKKF
PHIIVGTPGRIQDHINRRTIRLNNVNTVVLDEADEMLNMGFIEDIEAILKEVPENKQTLL
FSATMPDPIRRIAETFMTNPQIVKVKAKEVTMPNIEQHFIEVQEKKKFDVLTRLLDIQTP
ELAIIFGRTKRRVDELSEALNLRGYAAEGIHGDLSQAKREQVLRKFKSGSIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKSGIAMLFITPREFNQLKNIERTTK
RRMERMTAPTLDEAIESQQRIIAEKLTSTMESDNLAFYKRIAEELLEEHDSVSVVAAALK
MLTKEPNETPIRLTDEPPMVKRDRGGRGGNGGNGGGGYRRGENRRGGGDGRRSDNRRGDG
RRGDRDNRGGSFRNKRSEGPRDNNRGGQRKPQDSSK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcaagaattaggattaagtagtaaaatcctgtttgcgattgaaaaatta
ggcttcgaggaagctacaccaattcaagcgcagactattccattagcaaaacaaggccat
gatgtaattggtcaagcgcaaactggtactggtaaaacagccgctttcggtattccatta
ctagaaaaaattgatgtagatagtagcaatgtccaaggacttgttatcgctcctacgcga
gagctagctattcaagttggcgaagaattacacaaaatcggtatgaataaaggtgttaaa
atccttccgatttacggtggacaagatattaatcgtcaaatgcgttcattaaaaaaattc
ccacatattattgtaggaactcctggtcgtattcaagaccatattaaccgtcgtacaatt
cgcctaaacaatgtaaatacagttgttttagatgaagcggatgaaatgttaaacatggga
ttcattgaagatattgaagcgatcttaaaagaagttccagaaaacaaacaaacacttctt
ttctctgctacaatgccagatccaattcgtcgcattgcagaaactttcatgacgaatcca
caaattgtaaaagtaaaagcaaaagaagttacaatgcctaacattgaacaacattttatt
gaagttcaagaaaagaaaaaatttgacgttcttacacgtttattagatattcaaacacca
gaattagcaattatttttggtcgtacaaaacgtcgtgttgatgaattatcagaagcatta
aacttacgtggttatgctgcagaaggtattcatggtgatttatcacaagcaaaacgtgag
caagtacttcgtaaatttaaatctggttcaattgatgttttagttgcaactgatgtagcg
gctcgtggattagatatttctggcgttacacatgtatacaactttgatattccacaagat
cctgagagctatgttcaccgaattggacgtactggtcgtgctggaaaatcaggtatagcg
atgttatttattactcctcgtgagtttaatcaattaaaaaatatcgaacgtacaactaag
cgtcgtatggaacgtatgactgcacctacattagacgaagcaattgaaagccaacaacgt
atcattgcagagaaattaacttcgactatggaaagtgataatttagcgttctacaaacgt
attgcagaagaattacttgaagagcatgattctgtaagtgttgtagctgcagctttaaaa
atgttaacaaaagagccaaatgaaacaccaattcgtttaactgatgagccaccaatggtc
aaacgtgaccgtggcggacgcggtggaaacggcggaaacggtggcggcggataccgtcgt
ggagaaaatagacgtggcggtggagatggacgtcgtagcgataatcgtcgtggagatgga
cgtcgtggagaccgagataaccgtggcggaagtttccgtaacaaacgtagcgaaggtcct
cgtgataacaaccgtggtggacaacgtaaaccacaagacagcagtaaataa
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