Arthrobacter citreus: HPK19_20245
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Entry
HPK19_20245 CDS
T06606
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
acit
Arthrobacter citreus
Pathway
acit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPK19_20245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acit03000
]
HPK19_20245
Transcription factors [BR:
acit03000
]
Prokaryotic type
Helix-turn-helix
Other families
HPK19_20245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
TPR_12
TPR_1
Lipoprotein_3
TPR_2
DUF1818
HTH_31
TPR_8
Motif
Other DBs
NCBI-ProteinID:
QKE74909
LinkDB
All DBs
Position
complement(4234101..4235321)
Genome browser
AA seq
406 aa
AA seq
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MYEGKIIKYYREKSQMTQEQLGKGICSSTHISKIERSQTEYAHEIITLLSDRLGIKIEQE
ILKLQNIKKQIDNWQQAIAMQLFDEVEKINIELEQEELIQISNYINQYKLLRIRYFLIQN
LLDKALELIGEIKKIKHKLTPYELNLFRHVLGIYHLTIHEPLHAIQVLKEINNGEYANEE
YFYHLASAYHSNELSVMAYFYADKARQYFKSINSYLRVIDSEMLMLIQVKDNEDFTEIIK
RFENLIQSCEICKSNERKARVFHNLAFEYYRRNDYKLAKKYYFESMKLKDHKSIPYILSL
EGYIRSSYYGELLPKGELLQLINEGYQLASEKSDKLFICLFTLLDLLILEKEQDYHRYLS
DYSLPYFKKLGFAYLINQSEKELFNYYFKCKQTRKALGIANTLINQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggggaaaatcataaaatattatcgagaaaaatctcaaatgacacaagagcaa
ttaggaaaaggtatttgttctagtacacatattagtaaaattgaaagatctcaaactgaa
tatgcacatgaaatcattacactactatcagatcgacttggaataaaaattgaacaagag
attttaaaattacaaaatatcaaaaagcagatcgataactggcagcaagcaattgctatg
caattatttgatgaagtagaaaaaatcaacatagagcttgaacaagaagagctaattcaa
atatcaaattatataaatcaatacaaattactccgcattcgatactttctaatacaaaat
ttacttgataaagcattagagctcattggtgaaatcaaaaaaataaagcataaattaacg
ccttacgaactaaatctttttagacatgtgttaggaatttaccacttaacaatccacgaa
cctttacatgccattcaagttttaaaagaaataaataatggggaatatgctaatgaagaa
tatttttatcatttagcatcagcctatcactcaaacgagttgtctgtaatggcctacttc
tatgctgataaagctcgtcaatatttcaaaagtattaattcctatctacgtgtaattgat
tccgagatgcttatgctcatacaagttaaagataatgaagactttacagaaatcattaaa
aggtttgaaaacttaatccaaagctgtgaaatttgcaaatcgaacgaacgaaaagctaga
gtatttcataatttagcatttgaatactatcgaagaaacgattacaaattagcaaaaaaa
tattattttgagtcgatgaaattgaaggatcataaatcgatcccatacatactatcactc
gaaggatatatacgaagttcctattatggagaacttttacccaaaggagaattactacaa
cttattaatgaaggctaccagttagcttccgagaaaagcgataaattgtttatctgttta
tttactttattagatctattaattttagaaaaagaacaagattatcatcgatatttatcg
gattactcattaccatattttaaaaaattaggctttgcatatttgatcaatcagtcggaa
aaagaattgtttaactattattttaaatgcaaacaaacacgtaaagcacttggaattgct
aatacattaataaatcaataa
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