Arthrobacter citreus: HPK19_21455
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Entry
HPK19_21455 CDS
T06606
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acit
Arthrobacter citreus
Pathway
acit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPK19_21455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acit03019
]
HPK19_21455
03009 Ribosome biogenesis [BR:
acit03009
]
HPK19_21455
Enzymes [BR:
acit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPK19_21455
Messenger RNA biogenesis [BR:
acit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPK19_21455
Ribosome biogenesis [BR:
acit03009
]
Prokaryotic type
rRNA helicases
HPK19_21455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Plasmodium_HRP
Motif
Other DBs
NCBI-ProteinID:
QKE75131
LinkDB
All DBs
Position
4526119..4527984
Genome browser
AA seq
621 aa
AA seq
DB search
MNKFSSLGLSEELTEYLTELGITEPTPIQEKAIPIVFEGKDLIGQAQTGTGKTFAFLFPI
LERINLELPHTQALVVAPTRELALQITAEAKRIVSEDFGVLAVYGGQDVEQQARKLKSGA
HLIIATPGRLLDHLRRGTIKLDKVDFLVLDEADQMLHIGFLHEVEDIINQTPVSRQTLLF
SATMPDQIQSLAKRYMKKPEVIKVKAKRITLDEIEQLIIETTDRGKYNALLSQIKEAKPF
LAIIFCRTKRRANKLNEQLKGKGLLSEELHGDLTQGKREKVMKMFREAKIQYLVATDVAA
RGIDVDGVTHVFNYDIPLDTESYVHRIGRTGRAGDTGTAITFVTPKDFQDMKMIEKELNL
SINRIEMERVDRTENEGSTGRPDRSRGTGRTERSGSGSRTERSGSGSRTERSGSGSRTER
SGSGSRAERTGNAGRAERTGSGSRAERTGNASRAERSGNAGRAERTGSGSRAERTGSASR
AERTGSGSRAERTGSGSRTERTGSGSRTERSGSTSRAERTGNAGRAERTGNAGRAERTGN
AGRAERTGNAGRAERTGNASRAERSGSASRAERTGSASRAERSGYADRSGNAGRAGRTRN
DGRSRSTGSTRNEGRSGRRGR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattttcaagtttaggtttaagtgaagaattaacggagtatttaactgaatta
ggtattacagagcccactccaattcaagagaaggcaattccaattgtatttgaagggaag
gatttaataggccaagcacaaacaggaacgggtaaaacatttgcattcctatttccaatc
cttgaaagaattaacttagaattaccacatactcaagcattagtagttgctccaactagg
gagttagctcttcaaattacggctgaggcaaaaaggattgttagcgaagatttcggtgta
cttgccgtttatggtggccaagacgtcgaacagcaagcgcgcaaactaaaaagtggtgct
cacttaatcattgcaacacctggccgccttttagatcatttaagaagagggacaattaaa
ttagataaagttgattttctagtactcgatgaagcagatcaaatgttacatattggattt
ttacacgaggttgaagacattatcaatcaaacacccgtatcaagacaaacgttattattt
tctgctacgatgccagatcaaatccaatctctagcaaagcgctatatgaaaaaaccagaa
gtaataaaagtaaaagctaagagaattacactagatgaaattgaacaactaattatcgaa
acgacagatcgtgggaaatataatgcactgttgagccaaataaaagaggcaaaaccattt
ctagcgatcattttctgtagaacaaaaagaagagctaataagttaaatgaacaattaaaa
ggaaaaggattattatctgaagaacttcacggagatctaacccaaggcaagcgggaaaaa
gttatgaaaatgtttcgtgaagctaaaatacaatatcttgtagcaacagatgtagcagcc
agaggaatcgatgttgatggtgtaactcatgtattcaactatgatataccactagacaca
gaaagttatgttcatcgaattggaagaactggtcgagcaggagatactggtacagcgatt
acatttgttacgccaaaagattttcaagatatgaaaatgatagaaaaagaacttaatctt
tcaattaatagaatagaaatggaaagagtagatagaacagagaatgaaggaagtacaggc
agaccggacagatcaagaggtacaggaagaactgaaagatcaggaagtggcagcagaact
gaaagatcaggaagtggaagcagaactgaaagatcaggaagtggaagcagaactgaaaga
tcaggaagtggaagcagagcggaaagaacaggaaatgctggcagagcggaaagaacagga
agtggaagcagagcggaaagaacaggaaatgcaagtagagcagaaagatcaggaaatgct
ggcagagcggaaagaacaggaagtggaagcagagcggaaagaacaggaagtgcaagtaga
gcggaaagaacaggaagtggaagtagagcggaaagaacaggaagtggaagcagaactgaa
agaacaggaagtggaagcagaactgaaagatcaggaagtacaagcagagcggaaagaaca
ggaaatgctggcagagcggaaagaacaggaaatgctggcagagcggaaagaacaggaaat
gctggcagagcggaaagaacaggaaatgctggcagggcggaaagaacaggaaatgcaagt
agagcagaaagatcaggaagtgcaagtagagcggaaagaacaggaagtgcaagtagagcg
gaaagatctggatatgcggacagatcgggaaatgctggcagagcaggtagaacaagaaac
gatggaagatctagaagtacaggtagtacacgtaatgaaggaagatctggtaggagaggt
agatag
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