Arthrobacter citreus: HPK19_23770
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Entry
HPK19_23770 CDS
T06606
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
acit
Arthrobacter citreus
Pathway
acit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPK19_23770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acit03400
]
HPK19_23770
Enzymes [BR:
acit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HPK19_23770
DNA repair and recombination proteins [BR:
acit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPK19_23770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
AAA_12
AAA_22
UvrD-helicase
nSTAND3
SLFN-g3_helicase
DUF4926
DEAD
AAA
AAA_18
DEK_C
HHH
AAA_28
AAA_14
TsaE
RsgA_GTPase
Rad17
T2SSE
JHBP
TrwB_AAD_bind
NB-ARC
NPHP3_N
AAA_29
ABC_tran
NTPase_1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QKE75537
LinkDB
All DBs
Position
5008662..5011019
Genome browser
AA seq
785 aa
AA seq
DB search
MQTQSEMELFVDETPYIKGNVTTIIFYNAENFYTVAKVKVVDTNLSNCEQEMTITGNIPR
MNEDESYTFKGILKDHPRYGKQFQISSFEKELPSTKKGVIQYLSSDLFKGIGKKTAEKIV
DHLGEGAINKILDKSDSLEGVPGLAKAKAKEIYETILSHQGLEKVISFLSSYGIGTGLSI
KIYKTYNESTLDVIRTNPFKLIEDVDGIGFGRADEIGRAIGITGNHPDRIRAGCIYILEH
LSMQEGHVYITQDQFIDETRQLLMKQDKELVEALDISREMKRLVADGKLVMEDERIYLAA
LYYAEKGIVNAIQKLLSSAPDLGEMTESRFVKELEELEAKMKVKYAPSQAEAIKKAMESA
MMVLTGGPGTGKTTVIKGIVNLFSKIHELSLDQHSYPKDDPFPYLLAAPTGRAAKRMSEA
TGLPAVTIHRLLGWTREGEFSHHEDNPLNGKLLIIDEFSMVDVWLGNQLLKSIPEGCQVI
FVGDEDQLPSVGPGQVLKDLLNSGTVPTVRLKDIYRQSEDSSIITLAHYIKDGTISEDLF
EQRKDRSFIGCSSQQVVEVVKKVCENANKKGFPVRDIQVLAPMYRGPAGIDALNVGLQEV
FNPKKEKQREMHFGDTTYRTGDKVLQLVNVPENNVFNGDMGEIVNIFFAKENVEQQDIII
VSFDGNEVTYTRPDFSQLTLAYCCSIHKSQGSEFDIIVLPIVKSYYRMLRRNLIYTAVTR
SKKFLIICGEQDAFIQGIGRTDDGQRQTTLCMKLKGIENGEVQLDNDLPFQLSDELPNLS
PYDFM
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgcaaagtgaaatggaattgtttgttgatgaaacaccttatattaaaggaaat
gtcacaacaatcatcttttataatgcagaaaatttttatactgttgcaaaggtaaaagtg
gtcgatacaaatttatcaaattgtgaacaggaaatgaccattactgggaatattccaaga
atgaatgaagatgagtcatatacatttaaagggattctaaaagaccatccaaggtatggt
aaacaatttcaaatttcttcgtttgaaaaagagcttccatctactaaaaaaggtgttatc
caatatttatcatcagatttgtttaaaggaattggaaagaaaacggccgaaaaaattgtt
gatcatctaggtgaaggtgcaattaataaaattttagataaatctgatagcttagaaggg
gttccagggctagcaaaagcaaaggctaaagaaatttatgagaccattttatctcatcaa
ggtcttgaaaaagtaataagctttctaagtagctacggtataggtacaggcttatcgatt
aaaatttataagacttataatgaatcaactctagatgttatacgaacaaatccatttaag
ttgattgaagatgtagatggaattggttttggaagagcagatgaaattggtcgagcaatc
ggaattactggaaatcatcctgatcgaatacgagcgggttgtatttatatattagagcat
ttatcgatgcaagaaggacatgtttatattacacaagaccagtttattgacgaaactaga
caattattaatgaaacaagataaagagcttgtcgaagcactcgacatttctcgggaaatg
aaacgtttagtagcagacggcaagctagtaatggaagacgagcggatttatttagctgcg
ctttattacgcagaaaaagggattgtgaatgcaatccaaaaattattaagcagtgctcca
gatttaggtgaaatgactgaatcgagatttgtaaaagagctagaagaacttgaagcaaag
atgaaagtgaaatatgcaccttcgcaagcagaagcaattaaaaaggcgatggagtcagcg
atgatggttttaacaggtgggcctgggacagggaaaacgacagtaataaaaggcattgta
aatcttttctcgaaaattcatgaactatcattagatcaacattcttacccaaaagatgat
ccattcccatatttgctggctgcgcctactggaagagctgcaaaacgcatgagcgaagca
acaggattaccagcagttacaattcatcgtttgcttggttggacaagagagggcgagttt
agccatcacgaggacaatcctttaaatggaaaattactgatcattgatgagttttcaatg
gttgatgtttggttagggaatcaactgttgaaaagtatcccagaaggctgccaagtgatc
tttgtaggggatgaggatcaattaccgtcagttggtccaggtcaagtattaaaggattta
ttaaactctgggacagttccaacagtgagattaaaagacatttaccgtcaatcagaagat
tcctcgattattacacttgcacattatataaaagatggaacaatttccgaggatttattt
gagcaaagaaaagatcgttcgtttatcggttgttcaagtcaacaagttgttgaagtcgtc
aaaaaggtgtgtgaaaatgccaataaaaaaggttttcctgtaagagatattcaagtgcta
gcaccgatgtatcgcggtccagcaggaattgatgcactaaatgttgggttgcaagaggtg
tttaaccctaaaaaagaaaagcagcgtgaaatgcattttggagatacaacttaccgtaca
ggtgataaagtactccaactcgtaaatgtccctgaaaacaatgtttttaacggtgatatg
ggtgagatcgttaatatatttttcgctaaagaaaatgtagaacaacaggacatcataatc
gtttcatttgatggaaatgaagtgacctatactagaccagatttttctcaattaacactt
gcttattgttgctcaatccataagtcacaaggtagtgaatttgatattattgtgcttccg
attgtaaaaagttattatcgaatgctacgaagaaatttaatttacacggcagtgacaaga
agtaagaagttcttaattatatgtggtgaacaagacgcatttattcaagggatcggtcga
acggatgatggacaaagacaaactacactatgtatgaaattaaaagggatcgaaaatggt
gaagtacagttagataatgatttgccatttcagctttcagatgaattaccaaatctttca
ccttatgatttcatgtaa
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