Acinetobacter sp. NCu2D-2: A3K93_02245
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Entry
A3K93_02245 CDS
T08302
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
aciu
Acinetobacter sp. NCu2D-2
Pathway
aciu02020
Two-component system
aciu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aciu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A3K93_02245
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A3K93_02245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aciu03021
]
A3K93_02245
Transcription machinery [BR:
aciu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A3K93_02245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
IL7
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
ANF81123
UniProt:
A0A172YLU2
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All DBs
Position
487459..488910
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AA seq
483 aa
AA seq
DB search
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQAQLDSNPLLEKVEEQSTSDDVS
IAEIEHDNKDLTTELNADHLPDDLPVDTDWDDVYTHQPTSLGAAEYEEREDNRQVHESLQ
QHLIEQVNLLNFSKIEKLIAHCIIDSLDEKGFLEVDIEDITSSVQKLLASMEYEEEVEHD
EVLVVLKHIQRLEPIGVGSRNLAECLLVQLASLPESTPCRNDAIKLMQHYELLITNELPK
LIKQTGLNQEQLRCAVDLLKTLKPHPGLEFENRESDYQIPDVVVVKKNEGWQVSLNPDVM
PKLRVNSFYANMIKRADQSDDNQYLRNHMLEAKNFIKSIDERHKTLLKVSTCIVEHQKMF
LELGAEGMKPLVLRDIAEEVELHESTVSRVTTNKYMLTPRGLFELKYFFSSHVGTTSGGE
ASSTAIRAKIKKLISEENVRKPLSDNAIAVLLKEDGIDVARRTVAKYRESLHIPSSSERK
VLI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatcagtgggcttaaaagttgcgaactcgctgtcattgactccacaattgcag
caagcgattcgcttattgcagctatcaagtttggagttagagcaagagattcaggcccaa
cttgatagtaatcccttattggaaaaggttgaggagcaaagtacgtcagatgatgtttct
attgcagaaattgaacatgataataaagatctgacaactgaacttaatgctgatcatcta
cctgatgatttgcctgttgatacagactgggatgatgtttacacacatcaaccgacaagt
ttaggtgctgcggaatatgaagagcgcgaagataaccgtcaagtccacgaaagtttgcag
caacatctcattgaacaagttaacttactcaacttttctaaaatagaaaaattaattgca
cattgcatcatcgattcattggatgaaaagggtttcttagaagttgatatcgaggatatt
acatcttctgtacagaaacttttagcatcaatggaatacgaagaagaagttgagcatgat
gaagtgcttgtggtgctcaaacatattcagcgcttagaaccaattggtgttggctcccgc
aacttagctgaatgtttgttggttcaattggcgagtctgccagaatctacaccatgtcgt
aatgatgccattaaactaatgcagcattacgaattattaattaccaatgaattaccgaaa
ttgattaaacaaacgggattgaatcaagagcagcttcgctgtgccgttgacctactcaaa
actttaaagccgcatccaggtttggaatttgaaaatcgcgaatctgattatcaaattcct
gatgtggttgttgtgaaaaagaacgaaggttggcaagtatctttaaatccagatgtcatg
ccaaaacttcgcgttaattctttttatgccaatatgattaaacgtgctgatcaaagtgat
gataatcagtatcttaggaatcatatgttagaagctaaaaactttataaaaagcattgat
gagcgtcataaaaccttattaaaggtctcaacatgcatcgttgagcatcaaaaaatgttc
ttagaattaggtgcagagggaatgaagccacttgtacttcgggatattgcggaagaagtg
gaattgcatgaatcaactgtttcacgtgtgacgacgaacaaatatatgctgacaccacgt
ggtttgtttgaattgaaatatttcttttcaagtcatgtgggaacgacttcaggcggtgag
gcatcttctactgcaattcgcgctaagattaaaaaattaatttctgaagaaaatgtccgt
aaaccattgtctgataatgcaattgcggttttattgaaagaagatggaattgatgtggcg
cgtcgtactgtcgcaaaatatcgtgaatcgttacatattccttcgtcttctgaacgaaaa
gtcttgatctaa
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