KEGG   Acinetobacter sp. NCu2D-2: A3K93_02245
Entry
A3K93_02245       CDS       T08302                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
aciu  Acinetobacter sp. NCu2D-2
Pathway
aciu02020  Two-component system
aciu02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:aciu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    A3K93_02245
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    A3K93_02245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aciu03021]
    A3K93_02245
Transcription machinery [BR:aciu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A3K93_02245
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR IL7 Arg_repressor
Other DBs
NCBI-ProteinID: ANF81123
UniProt: A0A172YLU2
LinkDB
Position
487459..488910
AA seq 483 aa
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQAQLDSNPLLEKVEEQSTSDDVS
IAEIEHDNKDLTTELNADHLPDDLPVDTDWDDVYTHQPTSLGAAEYEEREDNRQVHESLQ
QHLIEQVNLLNFSKIEKLIAHCIIDSLDEKGFLEVDIEDITSSVQKLLASMEYEEEVEHD
EVLVVLKHIQRLEPIGVGSRNLAECLLVQLASLPESTPCRNDAIKLMQHYELLITNELPK
LIKQTGLNQEQLRCAVDLLKTLKPHPGLEFENRESDYQIPDVVVVKKNEGWQVSLNPDVM
PKLRVNSFYANMIKRADQSDDNQYLRNHMLEAKNFIKSIDERHKTLLKVSTCIVEHQKMF
LELGAEGMKPLVLRDIAEEVELHESTVSRVTTNKYMLTPRGLFELKYFFSSHVGTTSGGE
ASSTAIRAKIKKLISEENVRKPLSDNAIAVLLKEDGIDVARRTVAKYRESLHIPSSSERK
VLI
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgaagttatcagtgggcttaaaagttgcgaactcgctgtcattgactccacaattgcag
caagcgattcgcttattgcagctatcaagtttggagttagagcaagagattcaggcccaa
cttgatagtaatcccttattggaaaaggttgaggagcaaagtacgtcagatgatgtttct
attgcagaaattgaacatgataataaagatctgacaactgaacttaatgctgatcatcta
cctgatgatttgcctgttgatacagactgggatgatgtttacacacatcaaccgacaagt
ttaggtgctgcggaatatgaagagcgcgaagataaccgtcaagtccacgaaagtttgcag
caacatctcattgaacaagttaacttactcaacttttctaaaatagaaaaattaattgca
cattgcatcatcgattcattggatgaaaagggtttcttagaagttgatatcgaggatatt
acatcttctgtacagaaacttttagcatcaatggaatacgaagaagaagttgagcatgat
gaagtgcttgtggtgctcaaacatattcagcgcttagaaccaattggtgttggctcccgc
aacttagctgaatgtttgttggttcaattggcgagtctgccagaatctacaccatgtcgt
aatgatgccattaaactaatgcagcattacgaattattaattaccaatgaattaccgaaa
ttgattaaacaaacgggattgaatcaagagcagcttcgctgtgccgttgacctactcaaa
actttaaagccgcatccaggtttggaatttgaaaatcgcgaatctgattatcaaattcct
gatgtggttgttgtgaaaaagaacgaaggttggcaagtatctttaaatccagatgtcatg
ccaaaacttcgcgttaattctttttatgccaatatgattaaacgtgctgatcaaagtgat
gataatcagtatcttaggaatcatatgttagaagctaaaaactttataaaaagcattgat
gagcgtcataaaaccttattaaaggtctcaacatgcatcgttgagcatcaaaaaatgttc
ttagaattaggtgcagagggaatgaagccacttgtacttcgggatattgcggaagaagtg
gaattgcatgaatcaactgtttcacgtgtgacgacgaacaaatatatgctgacaccacgt
ggtttgtttgaattgaaatatttcttttcaagtcatgtgggaacgacttcaggcggtgag
gcatcttctactgcaattcgcgctaagattaaaaaattaatttctgaagaaaatgtccgt
aaaccattgtctgataatgcaattgcggttttattgaaagaagatggaattgatgtggcg
cgtcgtactgtcgcaaaatatcgtgaatcgttacatattccttcgtcttctgaacgaaaa
gtcttgatctaa

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