Acinetobacter sp. NCu2D-2: A3K93_03925
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Entry
A3K93_03925 CDS
T08302
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
aciu
Acinetobacter sp. NCu2D-2
Pathway
aciu03030
DNA replication
aciu03430
Mismatch repair
aciu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aciu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3K93_03925
03430 Mismatch repair
A3K93_03925
03440 Homologous recombination
A3K93_03925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aciu03032
]
A3K93_03925
03400 DNA repair and recombination proteins [BR:
aciu03400
]
A3K93_03925
Enzymes [BR:
aciu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A3K93_03925
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
A3K93_03925
DNA replication proteins [BR:
aciu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A3K93_03925
RNase H
A3K93_03925
DNA repair and recombination proteins [BR:
aciu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A3K93_03925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_H
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ANF81425
LinkDB
All DBs
Position
complement(850397..851818)
Genome browser
AA seq
473 aa
AA seq
DB search
MSQTITLYVDGACRGNGKDIAVGGWGAYISCGSEEYKIYGGELQTTNNRMELSAAIEGVR
YCPQDAKLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWKELDAVCQGRDIEWNWIK
GHAGHEGNEMADHLANLGADLALEKGEKARQVPPSPFDLTSRGNNDKKKPQSDWLLDDPF
GFDLMEAEPVDEEVILETAEEVQMSTSVSDTEQTTTLSNPIDSDESKKTHPDIVITPATK
KLHGPRQLILDTETTGFYYQDGDRIIEVGAIEMINRKLTGSSIHIYINPKKSVGESENVH
GISDDFLKDKPLYEDIANTLFDYLKGAEIIAHNASFDMNFLDMEFTRAGFPALSEVCAVT
DTLAMAKSKHPGQKNSLDALVRRYEIPQRDRTFHGALLDAEILADVYLAMTGGQVSFDID
ALSHTEEENASSGPAKVEIDLPVIHASEEELEKHEKWVKQFEEKHGMPCLFAK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagacaatcacactctatgttgacggtgcttgccgcggtaatggtaaagatatt
gccgttgggggttggggtgcctatatctcatgtggttctgaagaatacaaaatttatggt
ggagaactacaaaccaccaataaccgtatggagctgagtgctgccattgaaggcgtgcgc
tattgtccacaggatgccaaattgattatttggaccgactccaattacgtcaaacaaggc
attacagaatggattcacggttggaaaaagaaaaactggaaagatgtcaaaaatcctgac
ctgtggaaagaactggatgccgtctgccaaggtcgtgacatcgaatggaactggattaaa
ggtcatgctggacatgaaggcaacgaaatggcagatcatctagccaacctaggtgcagat
cttgccctagaaaaaggtgaaaaagcacgtcaagttcctccatccccttttgatctgaca
tcacgtggcaataacgataaaaaaaaaccgcaatctgattggctcttagatgatcctttc
ggttttgatttgatggaagccgaaccagtggatgaagaagttattttagaaactgctgaa
gaagtacaaatgagtacgtctgtttcagatactgaacaaacaaccacattatcgaaccca
atagattctgatgaatctaaaaaaacacatcctgatattgtgattacacctgcgaccaaa
aaattgcatggtccccgccaactcattctcgataccgaaaccacaggtttctattatcaa
gacggcgatcgcattattgaggtgggtgcaattgagatgattaaccgtaaactcaccggt
agctcaattcacatctatatcaatccaaaaaaatccgtgggtgaatctgaaaatgtccat
ggtatttcagatgatttcttaaaagacaaaccgctgtatgaagatattgccaatacactt
tttgattatttaaaaggggcagagatcattgcacataacgcaagcttcgatatgaacttc
cttgatatggagttcacacgtgcgggcttccctgctttatctgaagtttgtgcagtcact
gatactctggctatggccaagtctaagcatccagggcaaaaaaactcacttgatgcctta
gtacgccgctacgaaattccacaacgtgaccgtactttccacggtgccttactcgatgcg
gaaattttggcagacgtctatttggcaatgaccggtggtcaggtgtcttttgatattgat
gcgctgtctcataccgaagaagaaaatgccagctcaggacctgcaaaagttgaaatcgat
ttgcctgtcattcatgcttctgaagaagaacttgagaaacatgagaaatgggtcaaacaa
tttgaagaaaaacatggcatgccatgcctttttgccaaataa
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