Acinetobacter sp. NCu2D-2: A3K93_05105
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Entry
A3K93_05105 CDS
T08302
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aciu
Acinetobacter sp. NCu2D-2
Pathway
aciu03030
DNA replication
aciu03430
Mismatch repair
aciu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aciu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3K93_05105
03430 Mismatch repair
A3K93_05105
03440 Homologous recombination
A3K93_05105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aciu03032
]
A3K93_05105
03400 DNA repair and recombination proteins [BR:
aciu03400
]
A3K93_05105
Enzymes [BR:
aciu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A3K93_05105
DNA replication proteins [BR:
aciu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A3K93_05105
DNA repair and recombination proteins [BR:
aciu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A3K93_05105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ANF81621
LinkDB
All DBs
Position
complement(1094521..1098093)
Genome browser
AA seq
1190 aa
AA seq
DB search
MHFVHLGIHTEFSITESIVRIPDLVKAAAKEEMPALAITDLSNLHAAVKFYKKCLGAGIK
PILGSEIRLNDAEHRVTLLSMSNKGWRNLTELVSEGFISGQQLDIPCVQKEWILNQSDDM
IVLLGMQSDVGKMLITSNPDKAEPLLEEWVEKFGNRVYLALTRTDRPNEDTFILEAVKLA
KKYNIGVVAHNDVHFIERDDFEAHEARVCIADGYVLGDNRRPKTYSPEQYFKTAEEMTEL
FSDIPSAIENTYHIAKRCNVTIRLGFHDLPDYPIPEGHTIDTYFAHLCEEGLEERLNFLY
PPEQRGEDWPEIRKPYDERLAFEINIILTMQFPGYFLIVMDFIQWSKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVARTYGRD
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMIPTKPLGLSLEESLEAEPQLKDI
VTNPSNPDYDDASEIWEMALKLEGITRNTGKHAGGVVIAPTKLTDYSAVLCDADGTGRVA
QFDKDDVEAAGLVKFDFLGLRNLTVIEDAIQHINARPDITDPVNISYIPLDDKAAYDIFA
SANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIYRMHGGEFEYL
HPLLEKVLEPTYGIMVYQEQVMQAAQFCAGYTLGGADLLRRAMGKKKVEEMVKHRQIFIE
GAAKKDIDADTANHIFDYMEKFAGYGFNKSHAAAYALVAYQTAWLKAHYPAEFMSAVMTS
EMQNTDNVVFIIDDCRHNGLEVLPPSVNMSLYQFHASDPKTIVYGLGAIKGVGEAAMQSV
IESRQKDGPYKDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERADLMAQLPEAVQAA
DQARHNRETGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRNE
LKSFVPCPINELSPTRRGVTTVFAGLVVDVANFPNRMMVTLDDGTARIEISTNHERFQRF
KDIVQVDQVVVIEGEIYEREGFDRPLGRLTKAFSLNQIRQKRANSIKITLTPEHLTKTLS
RDLQQIMLPYCNVDMCNHIPVILYLDYGYATAELHLGINWKVAPLDEVLAKFRDYFGKSS
IHIEYQVKSKAAKVMTLEHARPVEVPPPPANMSMDDALDLYQSETQAQFS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcactttgttcatcttggtattcatacagaattttcgattacagaatccatcgtacgt
atacctgatctcgtcaaagctgctgcaaaagaagaaatgcctgcgcttgcgattactgac
ttatctaatttacatgctgcagtaaagttctataaaaaatgtttaggtgctgggattaaa
cccattttaggttctgaaatccgcctgaatgatgctgaacaccgcgtcaccctgctttct
atgagcaataaaggttggcgtaacctgactgaactggtatctgaaggttttattagcggt
cagcaacttgatattccctgcgtacaaaaagaatggatcctaaatcagtctgacgacatg
atcgttttgctcggcatgcaatccgatgtcggcaaaatgctgattacatcaaacccagac
aaagctgaaccgctgcttgaagaatgggtagaaaaatttggtaatcgtgtgtatttagcc
cttacacgtaccgatcgaccaaatgaagatacgtttattttagaagcggttaaactcgcg
aaaaaatacaatattggtgttgtggcacataacgacgtgcactttattgaacgtgatgac
tttgaagcacacgaagcacgtgtttgtattgcagatggctatgtactcggtgataaccgt
cgtccgaaaacttatagccctgaacaatattttaaaactgccgaggaaatgactgagctt
ttcagtgatattccttctgcgattgaaaacacctatcacattgccaaacgctgtaatgtc
acaattcgtttaggcttccatgacttacctgattatccaattcctgaaggtcataccatt
gacacttattttgcacacttgtgtgaagaaggtctggaagaacgtttaaacttcctctat
ccacctgaacaacgtggcgaagattggccagaaattcgtaagccttatgacgaacgtctg
gctttcgaaattaatattattttaaccatgcaattcccaggttacttcctgattgtcatg
gacttcattcaatggtcaaaaaataatggcgtgcctgttggccctggtcgtggttcaggt
gcaggttcacttgttgcctacagtttaaaaattaccgacctcgatccactgcgctatgac
ctgctgttcgaacgtttcttaaacccagaacgtgtctctatgcccgatttcgacgtcgat
ttctgtatcgcaggtcgtgaccgtgttattgattacgttgcacggacttatggccgcgat
gccgtatcacagattgccacgttcggtacaatggctgcaaaaggtgcgattcgtgacgtt
gcacgtgtcttgggtaaatcctatggtttggctgaccgtatttctaaaatgatcccaacc
aaacctttgggtttaagtttggaagaatcattagaagccgaaccacaactgaaagatatt
gtcacaaacccatccaaccccgattatgacgatgcgtctgaaatctgggaaatggcactc
aaacttgaaggcattacccgtaacacaggtaaacatgccggtggtgtagtaatcgcacca
accaagttgacggactactctgcggtgctttgtgatgcagatggtacaggtcgcgttgca
caattcgataaagatgatgtcgaagccgcaggtttggtaaaattcgacttcttgggtctg
cgtaacctgaccgtaattgaagatgcaattcagcacattaatgcacgcccagatattacc
gatccggtaaatatttcttatattccgcttgatgataaagcggcatatgacatcttcgca
tctgccaatacgacagcggtattccagtttgaatccgtgggcatgaagaaaatgctcaag
gaagcccgcccaagtaaattcgaagaaattatcgccttcgtatcactgtatcgtccgggt
ccaatggatctgattccagactttatttatcgtatgcatggtggtgagtttgaatatctc
cacccattacttgaaaaagtcttagaaccgacttacggcattatggtttaccaagaacag
gtgatgcaggcagcacagttctgtgcaggctatacgcttggtggtgcggatttacttcgt
cgtgccatgggtaaaaagaaagttgaagagatggtaaaacaccgtcaaatcttcatcgaa
ggtgctgcgaaaaaagatattgatgccgatacagccaaccatatcttcgactatatggaa
aaattcgcaggctatggttttaacaaatcacatgctgctgcttatgcccttgttgcttat
cagactgcttggctaaaagcacattaccctgctgaatttatgtctgcggttatgacatcg
gaaatgcaaaacaccgataacgtggtgtttatcattgatgactgccgtcataacggtcta
gaagttttaccaccgtcagtcaacatgtcgctctatcaattccatgccagcgatccaaaa
accattgtgtatggtttaggtgcgattaaaggtgtcggtgaagcggcaatgcagtcggtg
attgaatcacgtcaaaaagatggtccatataaagacctatttgacttctgtcatcgtatt
gatttgaagaaaatcaataaacgcacacttgaagccttaattcgtgccggtgcgctcgat
tgtttggggattgaacgtgccgacttaatggcacaacttccagaagcggttcaagcggca
gatcaagcacgtcataaccgtgaaactggcatcatggacttgtttggtgaagtcgaagaa
gtccaacgcaagcctgcaaaacccgtgaaaccttggtcagatgaagttcgtctgaaaggt
gaaaaagatactcttggtttatacctcacaggtcacccgattgacgtttaccgtaatgag
ctcaaatcatttgtcccatgcccgattaatgagctatctccaacacgtcgcggtgtaacg
actgtctttgctggtttggtggtcgatgttgccaacttcccgaaccgcatgatggtcacc
ttagatgatggtactgcgcgtattgaaatttcgaccaatcacgaacgcttccaacgcttt
aaagacatcgttcaagttgatcaagtcgttgtcatcgaaggtgagatttatgaacgtgaa
ggttttgatcgtccgcttggccgcttaaccaaagcctttagcctgaatcagattcgtcaa
aaacgtgccaatagtattaaaattaccttaacgccagagcatctgaccaaaacattaagc
cgtgatttacaacaaatcatgctgccttattgtaatgtcgatatgtgtaaccatattcct
gtgattctctatttggattatggttatgccaccgcagagcttcatcttggcatcaattgg
aaagttgctccattggatgaagttttagccaaattccgcgattactttggcaaatcaagt
attcacattgaatatcaagtgaaatctaaagctgccaaagtgatgacgctcgaacatgcg
cgacctgtagaagtgccacctccacctgccaatatgagcatggatgatgccttggactta
tatcagtctgagacacaggcacaattttcttaa
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