Acidovorax sp. JMULE5: EXV95_01085
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Entry
EXV95_01085 CDS
T10357
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aciv Acidovorax sp. JMULE5
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aciv03032
]
EXV95_01085
03400 DNA repair and recombination proteins [BR:
aciv03400
]
EXV95_01085
Enzymes [BR:
aciv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EXV95_01085
DNA replication proteins [BR:
aciv03032
]
Prokaryotic type
DNA Topoisomerases
EXV95_01085
DNA repair and recombination proteins [BR:
aciv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EXV95_01085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
XMAP215_CLASP_TOG
Motif
Other DBs
NCBI-ProteinID:
QLA79382
LinkDB
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Position
complement(219443..220615)
Genome browser
AA seq
390 aa
AA seq
DB search
MPALPPSPRAPSPPRPTSRPQKLPGGLVYVTPAMPGVTRVRSGAKAFRYRLPDGQWLQDP
DEVARIKRLAIPPAYTDVWICPLPHGHLQATGLDARGRRQYRYHPQWRAQRDEGKFEHMQ
AFGRVLPRLRSRVARDLAAHRNGQPLTRTLVLATLVRLLDTTYLRVGNEEYAATNRSYGL
TTLRTRHVQLKGSQLKLRFRGKSGVLHEVELDDPRVARVVRRCQQLPGQELFQYEDEDGS
LRTVGSGDVNDYLREITHGAADSEGDHFTAKDFRTWHGTTQALELTRLACTQPVATAADK
NVRYNAKAILAEVARQLGNTPAVCKKSYVHPAVLELGTRLASDAGPGLQAVWNHIGGTTS
PRGLSAAERRLLAFLRKPQKLHKARPTTKA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccctgcccccatcaccccgcgcaccatcaccaccccggcccaccagccgcccc
cagaagctccccggaggcctggtgtacgtcacacccgccatgcccggcgtcacccgcgtg
cgcagcggtgccaaggctttccgctaccgtttgcccgatggccagtggctgcaagacccg
gacgaggtcgcccgcatcaaacgcctggctatcccaccggcttataccgacgtgtggatt
tgccccctgccccacgggcacctgcaggccacggggctggacgcgcgcggacggcgccaa
taccgttaccacccgcagtggcgcgcgcagcgcgacgagggcaagttcgaacacatgcag
gcgtttggccgcgtgctcccgcgcctgcgcagccgcgtggcgcgcgaccttgcagcgcac
cgcaacggccagcctctgactcgcacgctggtgctggccacgctggtgcgcctgctggac
accacctacctgcgcgtgggcaatgaggaatacgccgccaccaaccgctcgtatggcctg
accacgctgcgcacgcggcatgtgcaactcaagggcagtcagctcaagctgcgatttcgc
ggcaagagcggcgtgttgcacgaggtcgagctggacgacccgcgcgtggcccgcgtggtg
cgacgctgccaacaacttccggggcaggaactctttcaatacgaggacgaagacggtagt
ttgcgcaccgtaggctcgggcgacgtgaacgactatctgcgcgagatcacgcacggcgcg
gcagactcagaaggtgatcatttcactgccaaggactttcgcacctggcacggcaccacg
caggcgctggagctgacgcgcctggcctgtacgcaaccagtagccaccgccgccgataaa
aacgtgcgctacaacgccaaggccatcctggccgaggtggcgcgccagctgggcaacacg
cccgccgtgtgcaagaagtcgtacgtgcacccggctgtgttggagctgggcacacgattg
gcatctgacgcggggcccggcctgcaggcggtgtggaatcacattggcggcaccacatcg
ccacggggcttgagcgcggcggagcgccgactgctggcgtttctgcgcaagccgcaaaag
ctgcacaaggcgcgccccaccaccaaagcgtaa
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