Acidovorax sp. JMULE5: EXV95_04065
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Entry
EXV95_04065 CDS
T10357
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EXV95_04065 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aciv03400
]
EXV95_04065 (uvrB)
DNA repair and recombination proteins [BR:
aciv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXV95_04065 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EXV95_04065 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_25
Kinesin
UB2H
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QLA79892
LinkDB
All DBs
Position
878217..880307
Genome browser
AA seq
696 aa
AA seq
DB search
MPDLTEVITEKQDGEFVHFPNSPFELFQPYPPAGDQPEAINKLVEGLNDGETFQTLLGVT
GSGKTFTMANVIARMGRPAIIFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSAINEHIEQMRLSCTKSLMERTDVVIVATVSAIYGIGEPESYHRMVMTL
RTGDKLGQRDVIAQLIRMQYQRNEADFSRGKFRVRGDTIDVFPAEHSELAVRIELFDDEI
ESLQLFDPLTGRVKQKIPRFTVYPSSHYVTPRDKVLAAVETIKMELSDRLKQLLADGKLV
EAQRLEQRTRFDLEMLSEVGHCKGIENYTRHLSGAAPGDPPSTLTDYMPKNALMFLDESH
QMIGQLNAMYSGDRSRKTTLVEYGFRLPSALDNRPLKFEEFEQRMRQVIFVTATPADYER
THSGQIVDQVVRPTGLVDPEVEVRPATHQVDDVLQEIRIRVEKHERVLITTLTKRMAEQL
TDYLTDNGVKVRYLHSDVDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRAERSLIQTIGRAARNLNGRAILYADRITDSMKKAMGETERRRIKQIAHNEAH
GITPRSIVKRVRDLIDGVYSEKAGKDAERLEHEALQRAKVEDMSEKDVAREIKRLEKLML
EHARNLEFEQAARVRDQLTRLKDQAFGAHGNDSVAL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccggatctcacagaagtcataacggaaaagcaagacggcgagttcgtccatttcccc
aactcccccttcgaactgttccagccgtacccaccggccggcgaccagcccgaggccatc
aacaagctggtggaaggtttgaacgatggggaaaccttccagacgctgctgggggtgacg
ggctctggcaagaccttcaccatggccaatgtgatcgcccgcatggggcgcccggcgatc
atcttcgcgcccaacaagacgctggccgcgcagctgtacagcgagttccgcgagttcttc
cccaagaacgccgtggagtatttcgtgagctactacgactactaccagcccgaggcgtat
gtgccgcagcgcgacctgttcatcgagaaggacagcgccatcaacgagcacatcgagcag
atgcggctttcgtgcaccaagagcctcatggagcgcacggatgtggtcatcgtggccacg
gtgtcggccatctacggcattggtgagcccgagagttaccaccgcatggtgatgacgctg
cgcaccggtgacaagctgggccagcgcgacgtaatcgcacagctgatacgcatgcaatac
cagcgcaatgaggctgatttttcgcgcggcaagttccgcgtgcggggcgacaccattgat
gtgtttccggccgagcattccgagctggccgtgcgcatcgagctgtttgacgacgagatc
gaaagcctgcagctgtttgacccgctcacgggccgcgtcaagcagaagatcccgcggttc
accgtgtacccaagcagccactacgtgacgccgcgcgacaaggtgctggcggcggtggag
acgatcaagatggagctgtcggaccggctcaagcagctgctggccgacggcaagctggtg
gaggcgcagcggctggagcagcgcacgcgctttgacctggagatgctcagcgaagtaggg
cactgcaagggcatcgagaactacacgcgccacctgtcgggcgccgcgcccggcgacccg
cccagcacgctgaccgactacatgcccaagaacgctctgatgttcctggacgaaagccat
cagatgatcggccagctcaatgccatgtacagcggcgaccgctcgcgcaagaccacgctg
gtcgagtatggctttcgtctgccctcggcgctggacaacaggccgctcaaattcgaggag
ttcgaacagcgtatgcggcaggtgatctttgtcaccgccacgccggcggactacgagcgc
acacactccggccagatcgtcgaccaggtggtgcgccccaccggactggtggaccccgag
gtggaagtacgtcccgccacccatcaggtggatgatgtgctgcaagaaatacgcattcgt
gtcgaaaagcatgagcgcgtactcattacaacactgaccaagcgcatggctgaacagttg
accgactacctgacggacaacggcgtgaaggtgcgctacctgcacagcgacgtggacacg
gtggagcgggtggagatcatccgcgacctgcgcctgggcgcctttgacgtgctggtgggc
atcaacctgctgcgcgaaggcctggatatccccgaagtgtccctggtggcgatcctggat
gctgacaaggaaggcttcctgcgggccgagcgcagcctgatccagaccatcggccgtgcg
gcgcggaacctcaatggccgggccatcctctatgcggaccgcatcaccgactccatgaaa
aaagccatgggcgagacggaacgtcggcgcatcaagcagatcgcacacaacgaggcccac
ggaatcacgccgcgcagcattgtcaagcgggtaagagacctgattgacggggtttacagc
gaaaaggccggtaaggacgcagaacggctggagcatgaagccctgcagcgcgccaaggtg
gaggacatgtcagagaaagacgtggcgcgcgagatcaagcggctggaaaaactcatgctg
gaacacgcccgcaatctggagtttgagcaggcagcccgggtgcgggaccaactcacgcgg
ctcaaggaccaggcatttggtgcacatggcaatgattcggtggccttgtaa
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