Acidovorax sp. JMULE5: EXV95_05485
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Entry
EXV95_05485 CDS
T10357
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv00541
Biosynthesis of various nucleotide sugars
aciv01100
Metabolic pathways
aciv01250
Biosynthesis of nucleotide sugars
Module
aciv_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EXV95_05485 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
aciv01005
]
EXV95_05485 (kdsB)
Enzymes [BR:
aciv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
EXV95_05485 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
aciv01005
]
Lipid A
EXV95_05485 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
SIP
DUF2064
Motif
Other DBs
NCBI-ProteinID:
QLA80138
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Position
1198520..1199356
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AA seq
278 aa
AA seq
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MSAATDPGTPGAPTASGRFTVLIPARMASSRLPDKPLADIAGLPMVVRVAQRAAQSAAAR
VVVAADDPRILQACTAHGVQAILTRADHPSGSDRLAEACTQLGLDGDDVVVNVQGDEPLI
DPGLIDAVAALLPTQPEASMGTAAHAIASLADYTNPNVVKVVLDARGLAHYFSRAPIPFA
RDHMGLAWWQGAAEAAAPGVADLAGFAPLRHVGVYSYRAGFLRQFPALAPAPTEAVEALE
QLRALWHGHRIAVHLANAAPGPGVDTPADLERVRSLFR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcagcaacggatcccggcacgccaggcgctccaaccgcgagcggtcgcttcacg
gtgctgatcccagcgcgcatggcatccagccgcttgcccgacaaacccctggccgatatc
gcgggcctgcccatggtggtacgggtggcccagcgtgccgcccaaagtgcagcagcccgc
gtggtggtggcagccgatgacccccgcatcctgcaggcctgcaccgcccatggcgtgcaa
gcgatactgacccgcgccgaccaccccagcggcagcgaccgcctggccgaagcctgtacc
cagctgggcctggacggggacgacgtggtcgtcaacgtgcaaggcgatgaacctttgata
gaccccggcctcatcgacgctgtggcagccctcctgcccacccagccggaggccagcatg
ggcaccgcagcccacgccattgcgtcactggccgactacaccaaccccaacgtggtgaaa
gtggtgctggacgcgcgtggcctagcccactacttcagccgcgcgcccatcccttttgcg
cgggaccatatgggattggcctggtggcaaggtgccgccgaggcggcggcacccggtgtg
gcggacctggcgggattcgcgccactgcggcatgtgggcgtctacagctatcgcgcaggc
tttctgcgccaatttcctgccctggcacccgcccccaccgaggcggtggaagcgctggag
caactgcgcgccctgtggcacggccaccgcattgcggttcacctggccaacgcagcccct
ggcccgggcgtggatacgcccgcagacctggaacgggttcgcagccttttccgatga
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