Acidovorax sp. JMULE5: EXV95_06535
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Entry
EXV95_06535 CDS
T10357
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
aciv Acidovorax sp. JMULE5
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aciv03032
]
EXV95_06535
03036 Chromosome and associated proteins [BR:
aciv03036
]
EXV95_06535
03400 DNA repair and recombination proteins [BR:
aciv03400
]
EXV95_06535
DNA replication proteins [BR:
aciv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EXV95_06535
Chromosome and associated proteins [BR:
aciv03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EXV95_06535
DNA repair and recombination proteins [BR:
aciv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EXV95_06535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
NPFF
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QLA80327
LinkDB
All DBs
Position
1437367..1437717
Genome browser
AA seq
116 aa
AA seq
DB search
MPQDSMTRSDLVEELAARFGQLTHRDAEYAVKTILDAVGEALVRGHRIEIRGFGSFSVNH
RPPRMGRNPRSGEAVAIPEKRVPHFKPGKALREAVDKRTAEMEENSGAASSTTIQK
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgccccaagattccatgacccgctcagacctcgttgaagaactggccgcgcgctttggt
cagctcacccatcgagatgccgaatacgccgtcaagaccatcctggacgccgtgggcgag
gccctggtgcgtgggcaccgcatcgagatccggggctttggcagcttctcggtaaaccac
cgcccaccccgcatgggacgcaatccgcgcagcggcgaggccgtggccatccctgaaaaa
cgggtgccccatttcaagcctggcaaggccctgcgtgaagccgtggacaagcgcaccgcc
gagatggaagaaaactcgggtgccgccagcagcacaaccattcaaaaataa
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