Acidovorax sp. JMULE5: EXV95_07570
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Entry
EXV95_07570 CDS
T10357
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXV95_07570 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aciv03021
]
EXV95_07570 (rho)
03019 Messenger RNA biogenesis [BR:
aciv03019
]
EXV95_07570 (rho)
Transcription machinery [BR:
aciv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EXV95_07570 (rho)
Messenger RNA biogenesis [BR:
aciv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EXV95_07570 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
Spore_III_AA
S1CSD-TOTE-2
AAA
ResIII
Motif
Other DBs
NCBI-ProteinID:
QLA80509
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All DBs
Position
1666782..1668044
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AA seq
420 aa
AA seq
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MHLNELKALHVSEVLKQAEELEIENTGRMRKQELMFAIIKKRAKTGEQIIADGVLEILPD
GFGFLRSPDTSFTASTDDIYISPSQVRRFNLHTGDMIEGEVRTPKDGERYFALNKLDSVN
GGPPEQNKHKVMFENLTPLFPKEQMKLERDFKGEENITGRIIDIIAPIGRGQRALIVAPP
KSGKTVMMQHIAHAITANNPDVHLMVLLVDERPEEVTEMQRTVKGEIIASTFDEPAARHV
HVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVVPSSGKVLSGGVDAAALQRPKRF
FGAARKVEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNCEIHLNRRLYEKRVFPAIEL
NKSGTRREELLLAPEILQKTRILRQFMYNMDEIESMELMIKNMKATKTNVDFFDMMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacttaaacgaactcaaggcactgcacgtgtctgaagtcctgaagcaagccgaagaa
ctcgaaatcgaaaataccggccgcatgcgcaagcaggagctgatgtttgcgatcatcaag
aagcgggccaagaccggggaacaaatcattgccgacggcgtgctggaaatcctgcccgac
ggtttcggcttcctgcgcagcccggacacgagctttaccgccagcacggacgatatctac
atcagcccgagccaggtgcgtcgcttcaatctgcacaccggcgacatgatcgaaggtgaa
gtccgcacacccaaagatggtgaacggtactttgcgctgaacaagctggactcggtcaac
ggcggcccgccggagcagaacaagcacaaggtgatgttcgaaaacctgacgcccctgttc
cccaaggagcagatgaagctggagcgcgacttcaagggcgaagaaaacatcacaggccgc
atcatcgacatcattgcgcccatcggccgtggccagcgcgcgctgatcgtcgccccgccc
aagagcggcaagacggtgatgatgcagcacatcgcccacgccatcacggccaacaacccc
gacgtgcacctgatggtgctgctggtggacgagcgccctgaagaagtgaccgaaatgcag
cgcacggtgaagggcgagatcatcgcctccaccttcgacgagcccgccgcccgccacgtg
cacgtggccgagatggtgatcgagcgcgccaagcgtctggtcgagctgaagaaggacgtg
gtcatcctgctggactccatcacccgcctggcccgtgcctacaacaacgtcgtgccctcc
agcggcaaggtgctgtccggtggtgtggacgccgccgcactgcagcgccccaagcgtttc
ttcggtgccgcacgcaaggtcgaagaaggtggctcgctcactatcatcgccaccgcgttg
gtcgataccggcagccgcatggacgaagtgatctttgaagagttcaagggcactggcaac
tgcgaaatccatctgaaccgccgcctgtacgaaaagcgcgtgttccccgccatcgaactc
aacaagagcggcacgcgccgcgaagagcttctgctggcgcccgagatcctgcaaaagacc
cgcatcctgcgccagttcatgtacaacatggacgagatcgagtcgatggagctgatgatc
aagaacatgaaggccaccaagaccaatgtggacttctttgacatgatgcgaagaggaggg
tga
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