Acidovorax sp. JMULE5: EXV95_08010
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Entry
EXV95_08010 CDS
T10357
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EXV95_08010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aciv03021
]
EXV95_08010
Transcription machinery [BR:
aciv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EXV95_08010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
PhyR_sigma-like
Sigma70_ECF
Rv2175c_wHTH
HTH_29
Sigma70_r3
GerE
HTH_24
RovC_DNA-bd
HTH_5
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QLA80588
LinkDB
All DBs
Position
complement(1769240..1769752)
Genome browser
AA seq
170 aa
AA seq
DB search
MSAAHPLHALYSHHHGWLQSWLRRRLGCADDAADLAQDTFVRLLARPTAIAPDAMREPRA
YLTTVARGLLVDFWRRGELERAYLADLALQPEVLQPSPEERLAAVQMLHAVDALLQGLTP
KARAAWLMNRLDGLTHAEIAEQLQVSVPRVRQYLANAMRHAYHLRFGGAA
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgctcatcccctgcacgcgctctacagccaccaccacggatggctgcagtcc
tggctgcgccggcggctcggttgtgccgacgatgcggccgacctggcgcaggacactttc
gtgcgcctgctcgcacggccgaccgccatcgcccccgacgcgatgcgcgagccgcgcgcc
tacctgaccacggtggcacgcgggctgctggtggacttctggcgccggggtgaactggag
cgcgcctacctggcagacctggccctgcagcccgaggtgctgcagccatcccccgaagag
cgcctggccgccgtgcagatgctccacgcggtcgatgcattgctgcagggcctgacgccc
aaggcgcgcgcagcgtggctcatgaaccggctcgatggcctcacgcatgcagagattgcc
gagcagctgcaggtgtcggtgccccgcgtgcgccagtacctggccaacgccatgcgccac
gcctaccacctgcgttttggcggcgcggcgtga
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