Acidovorax sp. JMULE5: EXV95_08465
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Entry
EXV95_08465 CDS
T10357
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv03420
Nucleotide excision repair
aciv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EXV95_08465
03430 Mismatch repair
EXV95_08465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aciv03400
]
EXV95_08465
Enzymes [BR:
aciv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXV95_08465
DNA repair and recombination proteins [BR:
aciv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXV95_08465
MMR (mismatch excision repair)
Other MMR factors
EXV95_08465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Viral_helicase1
UvrD-helicase
AAA_19
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
QLA80663
LinkDB
All DBs
Position
1866307..1867338
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AA seq
343 aa
AA seq
DB search
MDKSVVFAVAGSGKTTQLVSALDEVRRFLMVTYTDANYENLRAKVIERFGYLPPNIEIYT
YFRFLHSFCYRPFLRSKKETRGLTFNPPDRFPAYPLTDDRRYISPSRWLYANRLAKFIEQ
SGLVDAVVDRIEKYFDVFFVDEVQDFGGNDFNFLLAISAAQVDMSFVGDFHQHTFDTSRD
GAVNAKLHENYDKYKKKFEQARLKVDTDSLKSSRRCSKSVCDFITEKIGIEIHSHDQRTS
VVRFEDDPAAVAALYRDPGIVKLFYREHQKYGCFSQNWGASKGMDSYEDVCVVLNPGNVK
AWNSGSFRDINPETRNKLYVACSRARGNLTFVPESLLKTYKRS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggataagagcgtagtctttgctgttgccgggtcaggcaagaccacccagctggtctct
gcgctggacgaggtgcggcgcttcctgatggtcacgtataccgacgccaactacgaaaac
cttcgtgccaaggtcatcgagcgcttcggctacctgccgcctaacattgagatatacacc
tacttcaggttcctgcacagcttctgctatcgaccgttcctgcgctccaagaaggaaaca
cgcggcctcaccttcaacccacccgaccggtttccggcctaccccttgaccgatgaccgg
cgttacatatcgcctagcaggtggctctacgcaaaccgcctcgccaagttcatcgaacag
tccggcctagttgatgctgtggttgaccgtatcgagaagtacttcgatgtcttcttcgtg
gacgaggtccaggacttcggcggaaatgacttcaacttcctattggcaatcagcgcggcc
caggtggacatgagcttcgtcggcgacttccaccagcacaccttcgacacgagccgcgac
ggcgccgtcaatgccaagctgcatgagaactacgataaatacaagaagaagttcgagcag
gctcgactaaaagtcgatacagacagcctcaaaagcagtcgccgctgcagcaagagcgtc
tgtgacttcatcacggagaagatcgggatcgaaatccattcgcatgaccaacggaccagt
gttgtgcggttcgaggatgaccctgcagcggttgcagccctctaccgtgatcccggcata
gtcaagctcttctacagggaacaccaaaagtacggctgcttctcccaaaactggggcgcg
tccaaaggcatggacagctatgaggacgtgtgcgtggtcctgaatcctggcaacgtgaag
gcctggaactccggcagctttcgggacatcaatccggagacgcgcaataagctgtacgtc
gcctgttcccgcgcaagaggcaatctgacgttcgtacccgaatctctattgaagacctac
aagcgctcctga
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