Acidovorax sp. JMULE5: EXV95_09175
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Entry
EXV95_09175 CDS
T10357
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXV95_09175 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aciv03019
]
EXV95_09175 (pnp)
03016 Transfer RNA biogenesis [BR:
aciv03016
]
EXV95_09175 (pnp)
Enzymes [BR:
aciv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EXV95_09175 (pnp)
Messenger RNA biogenesis [BR:
aciv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EXV95_09175 (pnp)
Transfer RNA biogenesis [BR:
aciv03016
]
Prokaryotic type
tRNA degradation factors
EXV95_09175 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
S1_2
DUF5813
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QLA80784
LinkDB
All DBs
Position
complement(2027497..2029743)
Genome browser
AA seq
748 aa
AA seq
DB search
MSIFNKVTKTFQWGDKTVIMETGEIARQASGAVLVNIDDTVVLATVVASKGAKPGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSEHETLTSRLIDRPIRPLFPEGFFNEVHVVIHTV
SLNPEVDADIAALIATSAALAISGIPFNGPIGAARVGYINGEYVLNPGQTARKNSQMDLV
VAGTEAAVLMVESEAQQLSEEIMLGAVVFGHEQGNVAINAIHELVRDAGKPVWQWEAPAK
DETLIAKVVALADDKLRAAYQIRNKQARTQACREAYAAVMAALKAEGVEFDAVKVEGMLF
DIEAGIVRSQILAGEPRIDGRDTRTVRPIEIRGSVLPRAHGSSLFTRGETQALVVTTLGT
ERDAQRIDALAGEYEDRFMMHYNMPPFATGEVGRMGSTKRREIGHGRLAKRALIAVLPTK
EEFPYTMRVVSEITESNGSSSMASVCGGCLSLMDAGVPMKAHVAGIAMGLIKDANRFAVL
TDILGDEDHLGDMDFKVAGTTAGITALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQ
EAMGEAKTEVSNFAPKLYTMKINPEKIRDVIGKGGAVIRALTEETGCQINIEEDGTITIA
ATDAAKADEAKKRIEQITAEVEIGKIYEGPVTKILDFGALINLLPGKDGLLHISQIAHER
VERVGDYLTEGQIVKVKVMETDEKGRVKLSMKVLADRPAGGSDRPAPAERGDREPRRDHG
RDGGRQPADQQQQQQSLPSDGGSGQIVG
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttcaacaaagtcaccaagaccttccaatggggtgacaagaccgtcatcatg
gaaacgggtgagatcgcccgccaagcgtccggcgctgtgctggtgaacattgatgacacc
gtggtgctggccaccgtggtggcatccaagggtgccaagccaggacaggacttcttcccc
ctgacggtggactacatagagaagacctacgctgcaggcaagatccccggcagcttcttc
aagcgcgaagccaagcccagcgagcacgaaaccctgaccagccgtctgatcgaccgtccg
atccgcccgctgttccccgaaggtttcttcaacgaagtgcatgtggtcatccacacggtg
tcgttgaaccccgaagtggacgctgacatcgcagccctcatcgctaccagtgcagccctg
gccatttctggcatcccgttcaacggccccatcggcgccgcacgcgtgggctacatcaac
ggcgaatacgtgctcaaccctggtcagactgcgcgcaagaactcgcagatggatctggtg
gtggcgggtacagaggccgccgtgctgatggtggaatccgaagcacagcaactgtccgaa
gaaatcatgctcggcgccgtggtgtttggccacgagcaaggcaatgtggccatcaacgcc
atccacgaactggtgcgcgatgctggcaagcctgtatggcagtgggaagcccctgccaag
gacgaaaccctgatcgccaaggtggtggccctggccgacgacaagctgcgcgcagcctac
cagatccgcaacaagcaagcccgcacgcaggcttgccgtgaagcttatgcggccgtgatg
gcagccttgaaggctgaaggcgttgaattcgacgctgtcaaggttgaaggcatgctgttc
gatatcgaagccggcatcgttcgcagccagatcctggctggtgagccccgcattgatggc
cgcgacacgcgcaccgtgcgccctatcgaaatccgtggcagcgtactgcctcgcgcccat
ggctcgtcgctcttcacgcgtggcgaaacccaggcgctggtggtgaccacgctgggcacc
gagcgcgacgctcagcgcattgatgcgctggctggcgagtatgaagaccgcttcatgatg
cactacaacatgcctccctttgccaccggcgaagtgggccgcatgggttcgaccaagcgc
cgcgaaatcggccacggccgtctggccaagcgcgctctgattgccgtgttgccgacgaag
gaagaattcccctacaccatgcgcgtggtgtccgaaatcaccgaatccaacggctcgtcg
tcgatggcctcggtctgcggtggctgcctgtcgctgatggacgcgggcgttccgatgaag
gcgcatgtggcgggtatcgccatgggcctgatcaaggatgccaaccgttttgccgtgttg
accgacattctgggtgatgaagatcatctgggtgacatggacttcaaggtggcgggcacc
acggccggtattaccgcgctgcagatggacatcaagatccaaggcatcaccaaggaaatc
atgcaggtcgccctggcccaggccaaggaagcgcgcatgcacatcctgggcaagatgcaa
gaggccatgggtgaagccaagaccgaagtgtcgaacttcgcgcccaagctgtacaccatg
aagatcaaccccgagaagatccgtgacgtgatcggcaagggcggcgcggtgatccgtgcg
ctgaccgaagaaaccggctgccagatcaacatcgaggaagacggcaccatcaccatcgcc
gccactgacgcagccaaggccgatgaggccaagaagcggattgagcagatcacggccgaa
gtcgaaattggcaagatctacgaaggccctgtgaccaagatcctggacttcggcgcactg
attaatttgctgccaggcaaggacggcctgctgcacatcagccagattgcccacgagcgc
gttgagcgcgtgggtgactatctgaccgaaggccagatcgtgaaggtcaaggtcatggaa
accgacgagaagggccgcgtcaagctgtcgatgaaggtgctggccgatcgtcctgccggc
ggcagcgaccgtcctgctccagcagagcgcggcgaccgcgaaccacgccgtgaccatggt
cgtgacgggggccgtcagccagcggatcagcagcaacagcaacagtccttgccttcggac
ggcggttccgggcagatcgttggctga
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