Acidovorax sp. JMULE5: EXV95_10040
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Entry
EXV95_10040 CDS
T10357
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv03030
DNA replication
aciv03410
Base excision repair
aciv03420
Nucleotide excision repair
aciv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXV95_10040 (polA)
03410 Base excision repair
EXV95_10040 (polA)
03420 Nucleotide excision repair
EXV95_10040 (polA)
03440 Homologous recombination
EXV95_10040 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aciv03032
]
EXV95_10040 (polA)
03400 DNA repair and recombination proteins [BR:
aciv03400
]
EXV95_10040 (polA)
Enzymes [BR:
aciv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXV95_10040 (polA)
DNA replication proteins [BR:
aciv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EXV95_10040 (polA)
DNA repair and recombination proteins [BR:
aciv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EXV95_10040 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXV95_10040 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QLA80943
LinkDB
All DBs
Position
complement(2221190..2223988)
Genome browser
AA seq
932 aa
AA seq
DB search
MTDKKTLVLVDGSSYLYRAFHAMPDLRAVPGDMTSAATGAIRGMINMMQALRKEVVADYA
VCVFDASGPTFRDALYTEYKATRSPMPDDLRSQIEPIHEVVDLLGWKVVAVPGVEADDVI
ATLANAAAAQGIEVIVSSGDKDLSQLVNEQITIIDTMSGKRRDVEGVTAEFGVPPALMVD
YQALVGDTVDNVPGVTKVGPKTAAKWLEEYGSLDNLIANADAIKGVAGNNLREAIASGQL
ALSRQLVTMKTDCALADYIPGLPAFDDITLDAPDSAGLLPFYEKYGFKGLASAIKGAAAP
AAAAPTVAMPGQSGDLFADHSASTVAEEAQHRTVVYDTILNWADFDQWLERLHKAPLTAI
DTETDSLDEMRAQIVGISFSVQPGEAAYIPLRHEGPDAPAQLPLDEVLVRLKPWLENPKH
HKLGQHIKYDRHVFANHGIEVQGYAHDTMLQSYVLEVHKPHNLTSLAERHTGRKGITYED
LCGKGAHQIPFAQVPVDKAAAYSCEDSDQTLDVHNALWPLLQADDKLRFIYELEMQSSEA
LYRIERNGVLIDAPTLAAQSHELGQRILQLETEAYEIAGQPFNLSSPKQLGEIFFDKLGM
PVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLSKLKGTYTDKLAQLALPRTGRVH
THYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPVGRVIASADYSQIELRIMAH
LSGDHSLLHAFHAGLDVHRATAAEVFGVEVDQVTSEQRRYAKVINFGLIYGMSSFGLAKN
LGIETKAAAAYIDKYFQRYPGVKQYMDDTKAAAKSMGYVETVFGRRLYLPEINSPNGPRR
SGAERAAINAPMQGTAADLIKLAMVAVQKELDAHKPDIKMIMQVHDELVFELPEGEVEWV
RSHIPRLMADVAALKVPLLAEVGVGPNWDKAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaaagaccctggtgctggtggacggctccagctacctctaccgcgccttt
cacgccatgcccgacctgcgggccgttcccggcgacatgaccagcgccgccactggcgcc
atccgaggcatgatcaacatgatgcaggcgctgcgcaaagaggtggtggctgactacgcc
gtctgcgtgttcgacgccagcggccccaccttccgcgatgccctgtacaccgaatacaag
gccacgcgctcacccatgcccgacgacctgcgcagccagatcgagcccatccacgaggtg
gtggacctgctgggctggaaggtggtggccgtgcctggcgtggaggccgacgacgtgatc
gccaccttggccaacgcagcagccgcacagggcattgaggtcattgtgtcgagtggcgac
aaagacttgagccagttggtcaacgagcaaatcaccatcatcgacaccatgagcggcaag
cgccgcgacgtggagggtgtgacggcagagtttggcgtgccgcctgcactgatggtggac
taccaggccctggtgggcgataccgtggacaacgtgcccggcgtgaccaaggtggggccc
aagacggccgccaagtggctggaagaatatggctcgctcgacaacctgattgccaacgcc
gacgccatcaagggcgtggcaggcaacaacctgcgcgaggcgattgccagcggccagctg
gccttgagccgccagctggtcaccatgaagaccgactgcgcgctggccgactacatcccc
ggcctgcccgcgtttgacgacatcacactggacgcgccggacagcgctggtttgctgccg
ttttacgaaaagtacggcttcaagggcctggccagtgcgatcaaaggtgcagcagcccca
gccgctgcagcccccaccgttgccatgcccggccaaagcggcgatctgtttgccgaccat
tccgccagcaccgtggccgaagaagcccagcaccgcacggtggtgtacgacaccatcctc
aactgggccgactttgaccagtggctggagcgcctgcacaaggccccgctcactgccatc
gacaccgaaacagactccctcgacgaaatgcgcgcgcaaatcgtcggcatctctttcagc
gtgcagcccggcgaggccgcctacattcccctgcggcacgaaggccccgatgcgcccgcg
caactgccgttggacgaagtgctcgtccgcctcaagccctggttggaaaaccccaagcac
cacaagctgggccagcacatcaaatacgaccgccatgtgttcgccaaccacggcatcgaa
gtgcagggctacgcgcacgacaccatgctgcaaagctacgtgctcgaagtgcacaagccc
cacaacctgaccagcctggccgagcgccacaccggccgcaaaggcatcacctacgaagac
ctgtgcggcaaaggcgcgcaccagatcccgtttgcgcaagtgccggtagacaaagccgcc
gcctactcgtgcgaagactccgaccagaccctggacgtgcacaacgccctgtggcccctg
ctgcaggccgacgacaagctgcgcttcatctacgaactggagatgcaaagcagcgaagcc
ctgtaccgcatcgaacgcaacggcgtgctcatcgacgcccccacgctggccgcacaaagc
cacgagctgggccagcgcatcttgcagcttgaaaccgaggcgtatgagattgcaggccag
cccttcaacctgagcagccccaagcaattgggtgaaatcttcttcgacaagctgggcatg
cctgtggtcaagaagaccgccaccggcgcccgcagcaccgacgaagaagtgctggagaag
ctggccgaggactaccccctgcccgccaagctgctagagcaccggtcgttgagcaagctc
aaaggcacctacaccgacaagctggcgcaactggccctgccacgcacgggccgcgtgcat
acccactacgcgcaggccgtggccgtcaccgggcgcttgtccagcaacgaccccaacctg
cagaacatccccatccgcacccccgaaggccgccgcgtgcgcgaagcctttgtggccccc
gtaggccgcgtgattgcgagtgccgactactcgcaaatcgagctgcgcatcatggcccac
ctcagcggcgaccactcgctgctgcacgccttccacgccggcctggacgtgcatcgcgcc
accgctgccgaagtgtttggggtggaggtagaccaggtcaccagcgagcaacgccgctac
gccaaggtcatcaacttcggcctcatctacggcatgagcagctttggcctggccaagaac
ttagggatagaaaccaaggccgcagccgcctacatcgacaaatacttccagcgctacccc
ggcgtgaagcagtacatggacgacaccaaggccgccgccaaatccatgggctacgtggag
actgtgtttggccggcgcctgtacctgcccgagatcaactcgcccaacggcccgcgccgc
tcaggcgccgagcgcgctgctatcaatgcccccatgcagggcacggcagcggacttgatc
aagctggccatggtggcggtgcaaaaggagctggacgcgcacaagccggacatcaagatg
atcatgcaggtgcacgatgaactggtgtttgagttgccggagggcgaggtggagtgggtg
cggtcgcacattccgcggttgatggcggatgtggcagcgctcaaggtgccgctgttggcg
gaggtgggggtggggcctaactgggataaggcgcactga
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