Acidovorax sp. JMULE5: EXV95_10105
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Entry
EXV95_10105 CDS
T10357
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv03420
Nucleotide excision repair
aciv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EXV95_10105
03430 Mismatch repair
EXV95_10105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aciv03400
]
EXV95_10105
Enzymes [BR:
aciv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXV95_10105
DNA repair and recombination proteins [BR:
aciv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXV95_10105
MMR (mismatch excision repair)
Other MMR factors
EXV95_10105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Sp-DndD
Motif
Other DBs
NCBI-ProteinID:
QLA80955
LinkDB
All DBs
Position
complement(2239675..2242137)
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AA seq
820 aa
AA seq
DB search
MFPQDPFPGAPEALVPPHAAAASAASPLLANLNDEQLAAVTLPAGHALILAGAGSGKTRV
LTTRIAWLLQNGYATPGGILAVTFTNKAAKEMVARLSAMLPVNVRGMWIGTFHGLCNRLL
RAHHKAAGLSQSFQILDTQDQLSAIKRLCKQHNVDDERFPPKQLSYFIANCKEEGLRPGD
VETHDSDARRKVEIYQLYEEQCQREGVVDFGELMLRSYELLRDNDAIREHYQRRFAHILV
DEFQDTNKLQYAWLKQLAGNEVGGRFEARGSVIAVGDDDQSIYAFRGARVGNMTDFVREF
DVQRQIKLEQNYRSYSNILDSANALISHNSRRLGKNLRTTQGAGEPVRVYEASSDLAEAQ
WMVDEIKQLVRNDGFERKEIAVLYRSNAQSRVIESALFNASVPYRVYGGLRFFERAEIKH
ALAYLRLLENPHDDTSFTRVVNFPPRGIGARSIEVLQDAARAAGCSLHDAVSAVSGKAGA
NLGAFVAMVDVLREQTQGLNLRGIIEQMLESTGLVEHFRTEKEGADRIENLQELVNAAES
FVTQEGFGRDAVALPLDEHGTPLTQSAQSPVSQGLDPNAPVLDEPLKPAVPGIVDADTGE
TLSPLAAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDGVFIGGMEEGLFPHENSA
SERDGLEEERRLMYVAITRARKRLYLSHSQTRMLHGQTRYNIKSRFFDELPEAALKWITP
KQQGFGSYAPNSGAGSAYPSIARGQFGFKSETFASPPVPVQKTAPSHGLRAGINVFHTKF
GEGKVLAIEGTGDDARAQVNFPRHGTKWLALSVAKLTVVD
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgttcccacaagacccgttcccgggtgcacccgaagccttggtgcccccacacgctgct
gcggcctcggctgcatcgcccctcctggccaatctgaacgacgagcaactggcggccgtc
accctgcccgcaggccacgcactgatactggcgggcgcaggctcgggcaagacccgcgtg
ctcaccacccgcatcgcctggctgctgcaaaacggctacgccacgcccggtggcattctg
gccgtcactttcacgaacaaggccgccaaagagatggtggcgcgtctgtccgcgatgctg
ccggtgaacgtgcgtggcatgtggatcggcaccttccacggcctgtgcaatcgccttttg
cgcgcgcaccacaaggcggcaggcctgtcgcagtcgtttcaaattctggacacgcaagac
cagctatcggccatcaagcgcctgtgcaagcagcacaacgtggacgacgagcgttttccg
cccaagcagctgtcctacttcatcgccaattgcaaagaagaaggcctgcgccccggcgat
gtggagacgcacgacagcgacgcccgcagaaaggtcgagatctaccagctgtacgaagaa
caatgccagcgcgaaggcgtggtggactttggcgagctgatgctgcgcagctacgagctg
ctgcgcgataacgacgccatccgcgagcattaccagcgccgcttcgcgcacatcctggtc
gatgagttccaggacaccaacaagctgcagtacgcctggctcaagcaactggcgggcaac
gaggtgggcgggcgctttgaggcgcgtggcagcgtgattgccgtgggcgatgacgaccag
agcatctacgccttccgtggcgcacgcgtgggcaacatgaccgacttcgtgcgcgagttt
gatgtgcagcgccagatcaagctggagcagaactaccgcagctacagcaacatcctcgac
tcggccaacgccctcatcagccacaacagccgccgcctgggcaagaacctgcgcaccacg
cagggcgcgggcgagcccgtgcgcgtgtacgaagccagctctgacctggcggaggcgcag
tggatggtcgatgagatcaagcaactcgtgcgcaacgacggctttgagcgcaaggaaatc
gccgtgctctaccgcagcaatgcgcaaagccgggtgatcgaatcggcgctgttcaacgcc
agcgtgccctaccgcgtgtacggtggactgcggttttttgagcgtgccgaaatcaagcac
gcgctggcttacctgcgcctcttggagaacccacacgacgacaccagcttcacgcgtgtc
gtcaactttccgccgcgtggcattggcgcgcgcagcatcgaagtgctgcaggacgcagcc
cgcgccgcaggctgctcgctgcacgacgcggtgagcgccgtgtccggcaaggcgggcgct
aacttgggcgcgttcgtcgccatggtcgatgtgctgcgcgagcagacgcaagggctgaac
ctgcgcggcatcattgagcagatgctcgaatccacgggcctggtggagcacttccgcacg
gagaaggaaggcgccgaccgcatcgagaacttgcaggaactggtcaacgctgccgagagt
tttgtcactcaggaaggttttggccgcgacgccgtggccctgccactggacgagcatggc
acgccgcttacccagagcgcccaaagcccggtcagccaagggctggaccccaacgcaccg
gtgctggacgaacccctgaagcccgccgtgccgggcatcgtggacgccgacaccggcgaa
accctctcgcccctggccgccttcctgacccacgccgcgctcgaagcgggcgacaatcag
gcccaggctggccaagacgccgtgcaactgatgaccgtgcacgccagcaagggcctggag
tttgacggtgtgttcatcggcggcatggaagagggcctgttcccccacgaaaactccgcc
agcgagcgcgatggtctggaggaagagcgccgactgatgtatgtggccatcacccgcgcc
cgcaagcgcctgtacctgagccactcgcaaacgcgcatgctgcatgggcagacgcgctac
aacatcaagagccgcttttttgacgagctgcctgaggccgcgctcaagtggattacgccc
aagcagcaagggtttggatcgtatgctcctaattcaggagctggaagcgcttatccatca
atcgctagaggccaatttggctttaaatccgagacctttgccagcccaccggtgccggtg
caaaagaccgcgccgtcccacggcctgcgcgcaggcatcaacgtgttccacaccaagttc
ggcgaaggcaaggtgctggccatcgagggaaccggcgacgacgcgcgtgcgcaggtcaac
ttcccgcgccatggcaccaagtggctggcgctcagcgtggccaagttgacggtggtggat
tga
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