Acidovorax sp. JMULE5: EXV95_13920
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Entry
EXV95_13920 CDS
T10357
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EXV95_13920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aciv03021
]
EXV95_13920
03400 DNA repair and recombination proteins [BR:
aciv03400
]
EXV95_13920
Enzymes [BR:
aciv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EXV95_13920
Transcription machinery [BR:
aciv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EXV95_13920
DNA repair and recombination proteins [BR:
aciv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EXV95_13920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QLA81641
LinkDB
All DBs
Position
complement(3060329..3061321)
Genome browser
AA seq
330 aa
AA seq
DB search
MQTNLLKPKAINVEQLGHNRAKVALEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEI
VNPDHVIANLSAGGKLDMQIKVEKGRGYVPGSLRRYADESTKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVVEIETNGAITAEDAVRASAKILVEQLAVFAQLEGGELAAFDA
PAGPRGNATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKS
LNEIKEVLASRGLTLGMKLENWPPAGLDKR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaatttgctgaaacccaaggcgatcaatgtcgagcagcttggccacaatcgt
gccaaggtcgcgctggagccgttcgagcgtggctacggtcacacgctgggcaacgccatc
cggcgcgtcctgctctcgtccatggtgggttacgcagcgacggaagtcaccattgcaggc
gttctgcacgagtactcgtccatcgatggcgttcaggaagatgtggtcaacatcctcttg
aacctcaagggcgtagtgttcaagctgcataaccgcgatgaagtcacgctgagcctgcgc
aaggatggcgaaggcgtggtcaccgcgcgcgacatccagacgccccatgacgtcgagatc
gtcaaccccgatcatgtgattgccaacctgtcggcaggcggcaagctggacatgcagatc
aaggtggaaaagggccgtggttacgtgcctggcagcctgcgtcgttatgctgacgaatcg
accaagtcgatcggccgcatcgtgctggatgcttcgttctcgcccgtcaagcgcgtgagc
tacaccgtggaaagcgctcgcgtcgaacagcgtaccgacttggacaagctggtggtcgag
atcgaaaccaatggtgccatcactgccgaagacgcagtgcgtgcatcggccaagatcctg
gtggaacagctggctgtgtttgcacagttggaaggtggcgagctggctgcgttcgacgca
cctgcaggtccacgcggcaatgccacgttcgatccgatcctgctgcgccctgtggacgag
ctggaactgacggtgcgctctgccaactgcctgaaggccgagaacatctactacatcggt
gacctgatccagcgcaccgagaatgagttgctcaagacccctaacctgggccgcaagtcg
ctcaacgagatcaaggaagtgctcgcatcgcgtggtctcacgctgggcatgaaactggaa
aactggccaccagctggcttggacaagcgttaa
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