Acidovorax sp. JMULE5: EXV95_17425
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Entry
EXV95_17425 CDS
T10357
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXV95_17425 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aciv03019
]
EXV95_17425 (recQ)
03400 DNA repair and recombination proteins [BR:
aciv03400
]
EXV95_17425 (recQ)
Enzymes [BR:
aciv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXV95_17425 (recQ)
Messenger RNA biogenesis [BR:
aciv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EXV95_17425 (recQ)
DNA repair and recombination proteins [BR:
aciv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EXV95_17425 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
QLA83847
LinkDB
All DBs
Position
complement(3813321..3815192)
Genome browser
AA seq
623 aa
AA seq
DB search
MSPAQSVLQDVFGYEQFRGPQQAIVEHVIGGGDALVLMPTGGGKSLCYQVPAIVRQQQGR
GVTIVISPLIALMHDQVGALHEAGVDAAFLNSTLSYDETQDVELRLQTGDLTLLYAAPER
LNTPRFLGLLDSLYSGGHLSLFAIDEAHCVSQWGHDFRPEYRALTLLHERYPQVPRIALT
ATADALTREDIVERLQLQDARLFISSFDRPNIRYRIEEKKDVTTQLLRFIEREHAGEAGV
VYCQSRKRVEELATTLSDAGITALPYHAGLDTKVRQKNQDRFLREEGIVMVATIAFGMGI
DKPDVRFVAHVDMPKNIEGYYQETGRAGRDGLNADAWMAYGLNDVVNQRRMIDESPAGEE
FKQALRGKLDALLALAEATDCRRVRLLAYFGEQSTPCGNCDNCLTPPAIWDATDAARKLL
STIYRVNQASGISFGTGHIMDILRGKKTEKVAQFGHEKISTFGIGADLTEPQLRGVLRQL
IATGALGLQKVMLDSGHSFDTLCLTEGSRAVLKGEVPVQLRESVSSAPAKRTRTRKGTGS
APPAAAANLGPDAQVRFINLKAWRAEVAKEHNLPAYVIFHDATLAAIAERNPGTLDDLQG
ISGMGAKKLEAYGADVLRVVRAG
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
ttgtcccctgcccagtctgtcttgcaggatgtcttcggctacgaacagttccgcggcccg
cagcaagcgatcgtcgagcatgtgattggcggcggcgacgcgctggtgctgatgcccacg
ggcggaggcaagtcgctgtgctaccaggtgccggccatcgtgcgccagcagcaggggcgc
ggggtgaccatcgtgatttcgccgctgatcgcgctgatgcacgaccaggtgggcgcgctg
cacgaggcgggggtggatgcggcgttcctgaactcgacgctgagctacgacgagacccag
gacgtggagctgcgcctgcagaccggcgacctcacgctgctgtatgccgcgcccgagcgg
ctgaacacgccgcgtttcctgggcctgctcgacagcctgtacagcggcggccacctgagc
ctgttcgccatcgacgaagcgcactgcgtcagccagtggggccacgatttccgccccgaa
taccgcgcgctcacgctgctgcacgagcgttacccgcaagtaccgcgcattgcgctcacc
gccacggccgatgcgctcacgcgcgaggacatcgtcgagcggctgcagctgcaggatgca
cggctgttcatcagcagctttgaccggcccaacatccgctaccgcattgaggaaaagaag
gacgtcaccacgcagctgctgcgcttcatcgagcgcgaacatgcgggcgaggcgggcgtg
gtgtattgccagtcgcgcaagcgcgtggaagagctggccaccacgctgagcgacgcgggc
atcacggccctgccctaccacgcgggtctggacacgaaagtgcgtcagaagaaccaggat
cgcttcctgcgcgaggaaggcatcgtgatggtggccaccatcgcgttcggcatgggcatc
gacaagccggatgtgcgttttgtggcccatgtggacatgcccaagaacatcgagggctac
taccaggaaacgggccgcgcgggccgcgacgggctgaacgccgatgcctggatggcctac
ggcctgaatgacgtggtcaaccagcgccgcatgatcgacgaaagcccggcgggcgaggag
ttcaagcaggcgctgcgcggcaagctggatgcgctgctggcgctggccgaggccaccgac
tgccgccgcgtgcggctgctggcctacttcggcgagcagtccacgccctgcggcaactgc
gacaactgcctgacaccgcccgcgatctgggacgcgaccgacgcggcgcgcaagctgctg
tccaccatctaccgcgtgaaccaggccagcggcatcagctttggcacggggcacatcatg
gacatcctgcgcggcaagaagaccgagaaggtcgcgcagttcgggcacgaaaaaatctcc
accttcggcatcggcgcggacctgaccgagccccagctgcgcggcgtgctgcgccagctg
atcgccaccggcgcgttaggcctgcagaaggtgatgctggacagcggccacagctttgac
acgctgtgcctcaccgagggctcgcgcgcggtgctcaagggcgaggtgccggtgcagctg
cgcgagtcggtgtcgtccgcaccggccaaacgcacgcgcacccgcaagggcacgggcagc
gccccacctgccgcggccgccaacctggggcccgatgcgcaggtgcgtttcatcaacctc
aaggcctggcgcgccgaggtggcaaaggagcacaacctgcctgcgtatgtgatctttcac
gatgccacgctggccgcgattgccgagcgcaaccccggcacgctcgacgacctgcagggc
atcagcgggatgggggcgaaaaagctggaggcgtacggggcggacgtcctgcgcgtggta
cgcgcggggtag
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