Acidovorax sp. JMULE5: EXV95_20460
Help
Entry
EXV95_20460 CDS
T10357
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv00521
Streptomycin biosynthesis
aciv00523
Polyketide sugar unit biosynthesis
aciv00525
Acarbose and validamycin biosynthesis
aciv00541
Biosynthesis of various nucleotide sugars
aciv01055
Biosynthesis of vancomycin group antibiotics
aciv01100
Metabolic pathways
aciv01110
Biosynthesis of secondary metabolites
aciv01250
Biosynthesis of nucleotide sugars
Module
aciv_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EXV95_20460 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EXV95_20460 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EXV95_20460 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EXV95_20460 (rfbB)
00525 Acarbose and validamycin biosynthesis
EXV95_20460 (rfbB)
Enzymes [BR:
aciv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EXV95_20460 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
QLA82803
LinkDB
All DBs
Position
4466543..4467637
Genome browser
AA seq
364 aa
AA seq
DB search
MILVTGGAGFIGANFVLDWLAASSEPVVNLDKLTYAGNLHNLDSVQGDARHIFVQGDIGD
TALVARLLAEHKPRAVVNFAAESHVDRSIHGPEDFIQTNIVGSFRLLEAVRAYWSALPEG
ERAAFRFLHVSTDEVYGSLAPTDPAFAETRGFEPNSPYSASKAASDHLVRAWHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLMIVNALAGKNLPVYGDGMQVRDWLYVKDHCSAIRRVLEA
GAPGETYNVGGWNEKPNIEIVNMVCSLLDELRPRADGQSYRTQITYVKDRPGHDRRYAID
ARKIERELGWKPAETFDTGIRKTVQWYLDHADWVASVQTGAYRDWVQTQYAQEASAAAVT
GATA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgattctggttactggcggcgcgggtttcatcggcgccaacttcgttcttgactggctt
gctgcctccagcgagcccgtggtcaacctcgacaagctcacctacgcgggcaacctgcac
aacctggacagcgtgcagggcgacgcgcgccatatctttgtgcagggcgatatcggcgac
accgcgctggtggcccgcctgctggctgagcacaagccgcgcgccgtggtcaacttcgcg
gctgaatcgcatgtggatcgctccatccatggccccgaggatttcatccagaccaacatc
gtgggctcgttccgcctgctggaggccgtgcgtgcctactggagcgcgctgcccgagggc
gagcgtgccgccttccgcttcctgcatgtgtccaccgacgaggtgtacggttcgctcgcc
cccaccgacccggccttcgccgagacgcgtggctttgagcccaacagcccttacagcgcc
agcaaggccgccagcgaccacctggtgcgcgcctggcaccacacctacggcctgccggtg
ctcaccaccaactgcagcaacaactatgggccctaccacttccccgaaaagctgatcccg
ctgatgatcgtcaacgcactggccggcaagaacctgcccgtgtatggcgatggcatgcag
gtgcgtgactggctgtacgttaaggatcactgcagcgccatccgccgcgtgctggaggct
ggcgcgcccggtgagacctacaacgtggggggctggaacgagaagcccaacatcgagatc
gtgaacatggtctgcagcctgctcgacgagctgcgcccccgtgctgacggccaaagctac
cgcacccagatcacctatgtgaaagaccgccccggccacgaccgccgctacgccatcgac
gcgcgcaagatcgagcgcgagctgggctggaagcccgccgagaccttcgacaccggcatc
cgcaagaccgtgcagtggtacctggaccatgcggactgggtggccagcgtgcagaccggc
gcctaccgcgactgggtgcagacccagtatgcgcaggaggcctccgctgcggctgtgacg
ggcgccactgcatga
DBGET
integrated database retrieval system