Acidovorax sp. JMULE5: EXV95_22490
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Entry
EXV95_22490 CDS
T10357
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EXV95_22490 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aciv03400
]
EXV95_22490 (mutM)
Enzymes [BR:
aciv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EXV95_22490 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EXV95_22490 (mutM)
DNA repair and recombination proteins [BR:
aciv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EXV95_22490 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
Desulfoferrod_N
DUF7573
Zn_ribbon_19
RNHCP
DUF2835
NFACT_N
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QLA83174
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Position
4909639..4910454
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AA seq
271 aa
AA seq
DB search
MPELPEVEVTRRSLVQAITGARIEAVTLGKPLRWPLGCAPQTLVGQQVMGLRRRGKYLLA
DTSRGVLLVHLGMSGSLRFSQGLPAAGVHDHFDMLTSQGTLRLHDPRRFGAVVYVHGEQD
PVATKLLGGLGMEPLSDGFSLAVFQAGLKKSQMPIKQLLLAGRLVVGVGNIYASEVLFLA
GIRPTTSASRIGPARVLKLHAAIRSVLARAVDMGGSTLRDFSNADGMAGHFQTQTNVYGR
DGAPCHVCGTSVKVLRQGQRSSYFCPMCQRP
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttgcccgaagtggaagtgacccgccgcagtttggttcaggccatcactggc
gcccgcattgaggcggtcacgctcggcaaacccttgcgctggcctctggggtgcgcgcca
cagactttggtggggcagcaggtgatgggcctgcgccgccgcgggaaatatttgctggcc
gataccagtcgaggagttctgctcgtgcatcttgggatgtcgggcagcctgcgcttcagc
caggggttaccagcggccggagtccacgatcactttgacatgctgaccagccagggaacg
ctgcggctgcacgatccgcgccgattcggtgccgtggtgtacgttcatggggaacaagac
cctgttgcaaccaagcttctgggcgggctgggaatggagccgctgtctgacggattctct
cttgctgttttccaggctggtctgaaaaagagccagatgcccatcaaacagttgctcctg
gctggccgactggtggtgggggttggcaatatctatgcgtcagaagtgctttttctggct
ggaatccgtcccacaacgagtgcgtctcgtatcgggcctgcgcgggtgctcaaattgcac
gctgccattcggtctgtattggcgcgggccgtggatatggggggcagcacgttacgcgat
ttttccaatgcagatggaatggcaggccactttcagacccagaccaacgtttatggacgc
gatggagcgccgtgtcatgtttgtggcacttcggtaaaggtgctgcgccaggggcagcgg
agcagctatttttgccctatgtgccagcggccttga
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