Acidovorax sp. JMULE5: EXV95_23375
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Entry
EXV95_23375 CDS
T10357
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv03410
Base excision repair
aciv03430
Mismatch repair
aciv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EXV95_23375 (recJ)
03430 Mismatch repair
EXV95_23375 (recJ)
03440 Homologous recombination
EXV95_23375 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aciv03400
]
EXV95_23375 (recJ)
DNA repair and recombination proteins [BR:
aciv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EXV95_23375 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EXV95_23375 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EXV95_23375 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QLA83322
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Position
complement(5105306..5107021)
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AA seq
571 aa
AA seq
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MKIVARDIPPRAAWALEQAGVHPLLARLYAARGVRAKDELDDGLGRLLPPSGLKGIDTAA
RLLADAMAQNKRLVIVADYDCDGATACAVGVRGLRLLGAQQVDYLVPDRVTDGYGLTASI
ARRVAERGADVLITVDNGIASVDGVAEAKALGLTVVVTDHHLPGPELPAADAIVNPNQPG
CTFESKSMAGVGVMFYVLLALRAELRARGIFDAATQPKLDPLLTLVALGTVADVVKLDAN
NRRLVAQGLKRIRAGQMPAGVAALFTAAGRKAPVATTFDFGFALGPRINAAGRLADMTLG
IECLLTDDAGRAAELAGTLDGINRERREIEGGMRDQAMLMAESLFQEDEEPPPAISVFDP
DFHEGVVGIVASRIKDKLHRPTFVFAASSAPGKEHELKGSGRSIPGFHLRDALDLVAKRH
PGVLLKFGGHAMAAGCTVDADSFDTFEQALAQVAQEWLDAATLTRRIETDGPLAPEYCRA
DMVDTLHREVWGQGFLPPTFSEEVQIVSQRLVGESKNHLSIKLMHQGNPVDAIWFGHTEQ
LPARVLLAFRLDVNEWKGERKVQFLVEGAQI
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagtagcaagagacattcccccccgtgccgcctgggcgctggaacaggccggt
gtgcacccgctgctggcgcgcctgtatgccgcgcgcggtgtgcgtgccaaagacgagctg
gacgacggcctgggccggttgttgcccccctcgggcctcaaaggcattgacaccgccgcg
cgcctgctggccgacgccatggcgcagaacaagcgcctcgtcatcgtggccgactacgac
tgcgatggcgccaccgcctgcgccgtgggtgtgcgcgggctgcggctgctgggcgctcaa
caggtggattacctcgtgccggaccgcgtgacggacggttatggcctcaccgcatccatc
gcccgccgcgtggccgagcgcggcgccgacgtactcatcaccgtggacaacggcatcgcc
agcgtggacggtgtggccgaggccaaggcgctgggcctcaccgtggtcgtcaccgaccac
cacctgcccggccccgagctgcccgcggccgatgccatcgtcaaccccaaccagcccggc
tgcactttcgagagcaagtccatggccggtgtgggcgtgatgttctacgtgctgctggcc
ctgcgcgccgagctgcgggcgcgcggcatttttgacgcggccacccaacccaagctcgac
ccgctgctcaccctggtggcgctgggcacggtggccgacgtggtcaagctcgacgccaac
aaccgccgcctggtcgcccagggcctgaagcgcatccgcgcaggccagatgcccgccggg
gtagccgcgctgttcaccgctgccggccgcaaggcgcccgtggccaccaccttcgacttt
ggcttcgccctaggaccgcgcatcaatgccgcagggcgcctggccgacatgacgctgggc
atcgaatgcctgctcaccgacgacgcaggccgcgccgccgaactggcgggcacgctcgac
ggcatcaaccgcgagcgccgcgagatcgaaggcggcatgcgcgaccaggccatgctgatg
gccgaaagcctgttccaggaagacgaagaaccgcccccggccatcagcgtgttcgacccg
gactttcacgaaggcgtggtgggcatcgtggccagccgcatcaaggacaagctgcaccgc
cccacctttgtctttgcggccagcagtgcgccgggcaaggagcacgagctcaaaggctcg
ggccgctccatccccggctttcacctgcgcgatgcgctggacctggtggccaaacgccac
ccgggcgtgctgctcaaatttggcggccacgccatggcggcgggctgcacggtggacgct
gactcgttcgataccttcgagcaagccctggcccaggtcgcgcaggaatggctcgacgcc
gccaccctcacccgccgcatcgagaccgacggccccctggcccccgaatactgccgcgct
gacatggtggacaccctgcaccgcgaggtctggggccagggctttttgccccccactttc
agcgaagaggtgcagatcgtgagccagcgcctggtgggcgaatccaaaaatcacctgtcg
atcaagctcatgcaccagggcaacccggtggacgccatctggttcggccacaccgagcaa
ctgcccgcgcgcgtgctgctggccttccggctcgatgtgaacgagtggaaaggcgagcgc
aaggtgcagtttttggtcgagggggctcagatctag
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