Acidovorax sp. JMULE5: EXV95_23490
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Entry
EXV95_23490 CDS
T10357
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aciv Acidovorax sp. JMULE5
Pathway
aciv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aciv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXV95_23490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aciv03019
]
EXV95_23490
Enzymes [BR:
aciv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EXV95_23490
Messenger RNA biogenesis [BR:
aciv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EXV95_23490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QLA83345
LinkDB
All DBs
Position
5135538..5137028
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AA seq
496 aa
AA seq
DB search
MTSSFSNLSLAEPLARAVAEMGYESMTPIQEQAIPVVLTGQDVMGAAQTGTGKTAAFSLP
LLQRLLKHESSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMK
PQTIELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSY
LPKQRTTLLFSATFSPEIKRLASSYLQNPITIEVARPNETASTVEQRFYSANDDDKRRAI
HQVLKTRGIKQAFIFVNSKLGCARLARSLEREGLKTTALHGDKSQDERLKALEAFKSGEV
DLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVTLVSGSDARL
VADIEKLIKKKIDLEAIEYEEDQPRGRINDGRRAWREAGETGDGRDALPAAPAAPRRERD
QRVGREGREQHRGFRPAVASRDPFFEKPYEASAAADATPAWEAAKSAPRSSVSANIKPKR
KVAALFKAAQPETSVQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttccttttccaatctatcgctggctgaaccgctcgcgcgcgccgtagccgaa
atgggctacgagtccatgacgcccatccaggagcaggccattccggtggtgctcacaggg
caagacgtgatgggcgcagcccagaccggcaccggcaagacggcggctttctcgctgccc
ctgctgcaacgcctgctcaagcacgaaagcagctccacatccccggcccgccaccccgtg
cgtgccctggtgctgttgcccacgcgcgagctggccgaccaggtggcccagcagatcgcg
ctgtacgccaagtacaccaagctgcgcagcaccgtggtgtttggcggcatggacatgaag
ccccagaccatcgagctgaaaaaaggcgtcgaagtgctggtggccacaccaggccgcctg
ctggaccacatcgaagccaagaacgcggtgctcaatcaggtcgagtacgtcgtgctcgac
gaggccgaccgcatgctggacatcggtttcctgcccgacctgcagcgcatcctgagctac
ctgcccaagcagcgcaccacgctcctgttcagtgccacgttctcgcccgagatcaagcgc
cttgccagcagctacctgcaaaaccccatcaccatcgaggtggcccgcccgaacgaaacg
gcctccaccgtggagcagcgcttctacagcgccaatgacgacgacaagcgccgcgccatc
caccaggtgctcaagacccggggtatcaagcaggccttcatcttcgtcaacagcaagctc
ggttgtgcccgtctggcgcgcagcttggagcgcgaaggcctcaagaccaccgcgctgcat
ggcgacaagagccaggacgagcgcctgaaggcgctcgaagccttcaagagcggcgaggtc
gatctgctggtgtgtaccgatgtggccgcgcgcggcctggacatcaaggacgtgcctgcg
gtgttcaacttcgacgtgccgttcaacgctgaagactatgtgcatcgcatcggccgcacg
ggccgtgctggcgcctcgggcctggcggtgacgctggtgtcgggcagcgatgcccgcctg
gtggccgacatcgagaagctgatcaagaagaagatcgatctcgaagccatcgaatacgaa
gaagaccagccccgcggccgcatcaacgacggccgccgtgcctggcgcgaagccggtgag
acgggcgacgggcgcgatgcgctgccggccgcccccgccgcgccacggcgcgagcgtgac
cagcgtgtcggccgcgaggggcgcgaacaacaccggggctttcgcccggccgtggcatcg
cgcgaccccttctttgagaagccgtatgaggccagcgcagctgccgacgcaacccccgcc
tgggaagccgccaagtcggctccgcgcagcagcgtgtcggccaacatcaagcccaagcgc
aaggtggcagcgctgttcaaggctgcccagccagagacttcggtgcagtga
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