Acidovorax sp. FHTAMBA: AAFF19_12630
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Entry
AAFF19_12630 CDS
T11687
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
acix Acidovorax sp. FHTAMBA
Pathway
acix03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AAFF19_12630 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acix03400
]
AAFF19_12630 (uvrB)
DNA repair and recombination proteins [BR:
acix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAFF19_12630 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AAFF19_12630 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_25
Kinesin
AAA_16
UB2H
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XAH16996
LinkDB
All DBs
Position
2676294..2678384
Genome browser
AA seq
696 aa
AA seq
DB search
MPEPTEVITEKQDGEFVRFPDSPFELFQPYPPAGDQPEAINKLVEGLHDGETFQTLLGVT
GSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSAINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGEPESYHRMVMTL
RVGDKLGQRDVIAQLIRMQYQRNEADFSRGKFRVRGDTIDVFPAEHSELAIRIELFDDEI
ESLQLFDPLTGRVKQKIPRFTVYPSSHYVTPRDKVLAAVETIKLELAERLQQLVADGKLV
EAQRLEQRTRFDLEMLSEVGHCKGIENYTRHLSGAAPGDPPSTLTDYMPKDAIMFLDESH
QMIGQLNAMYSGDRSRKTTLVEYGFRLPSALDNRPLKFEEFEQRMRQVIFVSATPADYEK
THSGQVVDQVVRPTGLVDPEVEVRPATHQVDDVLQEIRIRVEKHERVLITTLTKRMAEQL
TDYLTDNGVKVRYLHSDVDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRAERSLIQTIGRAARNLNGRAILYADRITDSMKKAMGETERRRIKQIAHNEAH
GITPRSIVKRVRDLIDGVYSEKAGKDAERLEQEALQRAQVEDMSEKDVAREIKRLEKLML
EHARNLEFEQAARVRDQLTRLKDQAFGAHGNDSVAL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacccactgaagtcattacggaaaagcaggacggcgagttcgtccgcttcccc
gattccccgtttgagctgttccagccgtatccaccggcaggcgaccagcccgaggccatc
aacaagctggtggaggggctgcatgacggggagaccttccagacgttgctgggcgtgacg
ggctcgggcaagaccttcaccatggccaacgtgatcgcgcgcatgggccgcccggcgatc
gtgttcgcgcccaacaagacgctggccgctcagctgtacagcgagttccgcgagttcttt
cccaagaacgccgtggagtacttcgtgagctactacgactactaccagcccgaggcgtac
gtaccccagcgcgacctgttcatcgagaaggacagcgccatcaacgagcacatcgagcag
atgcggctcagttgcaccaagagcctgatggagcggcgcgatgtggtgatcgtggccacc
gtgtcggccatctacggtattggagagcccgagagttaccaccgcatggtgatgacgctg
cgggtgggggacaagctggggcagcgtgacgtgattgcccagctgatccgcatgcaatac
cagcgcaatgaggctgatttttcgcggggcaagttccgcgtgcggggcgacaccatcgat
gtgttcccggccgaacactccgagctggccatccgtatcgagttgtttgacgacgagatc
gagagcctgcagcttttcgacccgctcacgggccgcgtcaagcagaagattccgcgcttt
accgtgtaccccagcagccactacgtgacaccccgcgacaaggtgctggccgccgtggag
accatcaagctggaactggccgagcgcctgcagcagctggtggcagacggcaagctggtg
gaagcgcagcggctggagcagcgcacccggtttgatctggaaatgctgagcgaagtgggc
cactgcaagggcatcgagaactacacgcgccacctctccggcgccgcgccgggcgatccg
ccgagcacgctgaccgactacatgcccaaggacgcgatcatgttcctggacgagagtcac
cagatgatcgggcagctcaacgccatgtacagcggcgaccgctcgcgcaagaccacgctg
gtcgaatatgggtttcgcctgccgtcagcgctggacaaccggccgctcaagttcgaggag
ttcgagcagcgcatgcggcaggtgatttttgtttcggccacaccggccgactatgaaaag
acccattccgggcaggtggtggaccaggtggtgcgacctaccgggctggtcgaccccgag
gtcgaagtgcgcccagccacccatcaggtggatgatgtgctacaagaaatacgcattcgc
gttgaaaagcatgagcgtgtactcattactacgctgaccaagcgcatggccgagcagttg
accgactacctgaccgataacggcgtgaaggtgcgctacctgcacagcgatgtggatacc
gtggagcgggtggagatcatccgtgacctgcgcctgggggcgtttgacgtgctggtgggg
atcaacctgctgcgcgaggggctggacatacccgaggtgtcactggtggccattctcgat
gccgacaaggaaggcttcctgcgcgccgagcgcagcctgatccagaccatcggccgtgcg
gcgcggaacctgaacggccgtgcaattttgtacgcagaccggatcaccgactccatgaaa
aaagccatgggcgagacggaacgtcggcgcatcaagcagatcgcacacaacgaggcccac
ggaatcacgccgcgcagcattgtcaagcgggtgagagacctgattgacggcgtttacagc
gaaaaagccggcaaggacgccgagcggctggagcaggaggccttgcagcgggcgcaggtg
gaggacatgtccgagaaggatgtggcccgagagatcaagcgcctggaaaagctcatgctg
gaacatgcgcgtaatctggagtttgagcaggctgcccgggtgcgcgatcagctcacgcgg
ctcaaggaccaggccttcggggcgcatggcaacgattccgtggccttgtga
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