Acidithiobacillus sp. YTS05: MQE22_02050
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Entry
MQE22_02050 CDS
T08616
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aciy
Acidithiobacillus sp. YTS05
Pathway
aciy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aciy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MQE22_02050 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aciy03021
]
MQE22_02050 (rpoA)
03400 DNA repair and recombination proteins [BR:
aciy03400
]
MQE22_02050 (rpoA)
Enzymes [BR:
aciy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MQE22_02050 (rpoA)
Transcription machinery [BR:
aciy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MQE22_02050 (rpoA)
DNA repair and recombination proteins [BR:
aciy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MQE22_02050 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UTV81419
LinkDB
All DBs
Position
428898..429908
Genome browser
AA seq
336 aa
AA seq
DB search
MAEVGELLCPQNYEIETTGAHSARVSLGPLERGFGHTLGNSLRRILLSSLKGVAVTEVEI
EGVLHEYASLEGVQEDVVDILLNLKQLAIRSNRQESQTITVRKRGPGPVTGADIVAEHGV
EVANPGHVIATITRDVEMVMHLRLDFGRGYQAAATRLRDHEKRIGVLALDASFSPVRRVS
FQVESARVEQRTDLDRLILDVETNGTIEPLAAIQEAARILRQQLDVFVGGEMPAVEELGK
VAVVEDLMPLLERPVDDLELTVRSLNCLKAEDIFYIGDLVQKSENELLKAPNLGRKSLTE
IKEILGGKGLSLGMRLQNWPPEGLPPLGNKDAVEAD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagttggcgagctgttgtgtccgcagaattacgaaatcgaaacgaccggtgcg
cattccgcccgcgtcagtttgggtcctctagaacgtggttttgggcacactctcggtaat
tcactgcggcggatcctcctttcctcgctgaaaggggttgcagttaccgaggtcgaaatc
gagggcgtcctgcacgaatacgccagtctggaaggggtgcaggaggatgtcgtggatatt
ctcctgaatctgaagcagctggcgatccgtagtaaccgtcaggagtcgcagaccattacc
gtgcgcaagcgcggaccggggcccgtcaccggcgccgatatcgtcgccgagcatggagtc
gaggtagcgaatccagggcacgttatcgcgaccattacccgggacgtcgagatggtgatg
catttgcgtctcgactttggtcgcggctatcaggcggccgcgacgcgcttgcgtgatcac
gaaaagcggatcggtgtgctggctctcgatgccagctttagcccggtgcgtcgtgtcagt
tttcaggtagagagtgcccgggtggaacagcgtaccgaccttgatcgcctgattcttgac
gtcgaaaccaatgggacaatcgagcccttggctgccattcaggaggcggcccgcatactc
cggcagcagttggacgtgtttgttggcggcgaaatgcccgccgtagaagagctggggaaa
gttgctgtggtcgaggatctgatgcctctgctggaacggccggtggatgatctcgagttg
accgtgcgttcgctgaattgtctcaaggccgaggatatcttctatatcggtgatctggtg
cagaaatcggaaaatgagctcttgaaggcgccgaatcttggtcgcaaatctctgacagag
atcaaggaaatcttgggcggcaagggcctatctctggggatgcggctgcagaattggccg
cccgagggcttaccaccgctgggtaataaagatgccgtcgaggcagactga
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