Acidithiobacillus sp. YTS05: MQE22_02320
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Entry
MQE22_02320 CDS
T08616
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
aciy
Acidithiobacillus sp. YTS05
Pathway
aciy02020
Two-component system
aciy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aciy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MQE22_02320
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MQE22_02320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aciy03021
]
MQE22_02320
Transcription machinery [BR:
aciy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MQE22_02320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
DUF3253
Motif
Other DBs
NCBI-ProteinID:
UTV81473
LinkDB
All DBs
Position
481031..482452
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AA seq
473 aa
AA seq
DB search
MKQGLELKLGQHLAMTPQLQQAIRLLQLSTLDLQQEVQMMLDSNPLLDEEEGVELAASDG
PSPAPEERQLDLAAETSLPEELPVDSQWEDVFDMGSSAAGSATANDEDLPDFEARNSREQ
SLQDYLRWQANLTFFESDDRNLAELIIDAIDDTGYLGAELSELVETSGRPLAELEAILRQ
IQEFDPPGVAARSLAECLSLQLQQIEEEDDALLLARRIVDEQLELLAKHDYVRLAQALDA
REEKLRAAVALIAALNPKPGSEIGAGASEYVIPDVIVRWVGKRLRVELNAEAMPRLRINR
HYAGLSGGKDAAHRYIQDQLNEARWFIKSLQSRQETILKVATAIVEQQKDFFMHGPEAMR
PMVLRDIAEAVEMHESTISRVTNQKFMTTPRGLFEFKYFFSSHVGTDQGGAASATAIRAV
ILKMVQAEDSQHPLSDAEIAKVLAEQGIQIARRTVAKYREAANIPPASQRRRL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggactcgaactcaaactcggtcagcatctggccatgaccccacaattgcag
caggcgatccgccttctgcagttgtcgaccctcgacctgcagcaggaagtgcagatgatg
ctcgacagtaatccactcctcgatgaggaagaaggcgtggagctggcggcgagtgatggt
ccatcccccgcaccggaggagcgccagctcgatcttgcggcggaaaccagcctgcccgaa
gagctgcccgtcgacagccagtgggaagatgtgttcgacatgggcagcagcgccgcagga
agcgcaacggccaatgatgaggatctgcccgatttcgaggcgcgcaacagccgcgaacaa
agcctgcaggactacctccgctggcaggctaacctcacctttttcgagagcgatgatcgc
aatctggcggagttgatcatcgatgccatcgacgataccggctatctgggcgcggagctt
agcgagctggtggagacctctggtcgaccgctggcggagctggaagcgatcttgcggcag
attcaggaatttgacccgccaggggtcgctgcccgcagtctggcggaatgcctttccttg
cagttgcagcagatcgaggaagaagatgatgccctgctcctcgcccgccgtatcgtcgac
gagcagctcgagcttttggccaaacatgactatgtccgcctggcgcaggccctggatgcg
cgcgaggagaagttgcgcgctgctgttgccctgattgctgccctcaatcccaaacccggc
agcgaaattggtgctggagcctcggaatacgtcattcccgatgtcatcgtgcgttgggta
ggcaaacggctgcgggtagaactgaacgccgaggcgatgccgcggctgcgtatcaatcgt
cattacgcgggcctgtccggcggcaaggatgccgcgcaccggtacatccaggatcagctc
aatgaggcgcgctggttcatcaagagcctacagagtcggcaggaaaccatcctcaaggta
gcgacggcgattgttgaacagcaaaaggatttttttatgcacgggccggaggcgatgcgt
cccatggtcctgcgcgacatcgccgaggccgtggagatgcacgaatcgacgatctcccga
gtcaccaaccaaaagttcatgaccaccccccgcggtttgtttgaatttaagtatttcttc
tccagtcatgtgggtacggaccaagggggggcggcgtctgccaccgctattcgtgccgtg
attctcaagatggttcaggcagaagacagccagcatccattgagcgacgccgaaatcgcc
aaggtactcgccgagcagggcatccagattgcccgccgtaccgtcgccaagtatcgtgag
gcggccaatattccgcccgccagccagcgtcgccgcttgtag
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