Acidithiobacillus sp. YTS05: MQE22_04800
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Entry
MQE22_04800 CDS
T08616
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
aciy
Acidithiobacillus sp. YTS05
Pathway
aciy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aciy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MQE22_04800 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aciy03400
]
MQE22_04800 (recC)
Enzymes [BR:
aciy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MQE22_04800 (recC)
DNA repair and recombination proteins [BR:
aciy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MQE22_04800 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
RLMM_N
Motif
Other DBs
NCBI-ProteinID:
UTV81948
LinkDB
All DBs
Position
952338..955736
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AA seq
1132 aa
AA seq
DB search
MAAPQLTLVHSQRAEDLRDLLVQWCSQHPLSPLSRETILVQSNGVAEWLKLGFAAEGIAA
GLDFLLPAQFLWRAYRAVLGRDAVPDASPFDKERLRWRLFRLLAELHDPVYAPLHRYLQR
DPEGRRRFQLAERVADLYDQYQVYRADWLVAWEAGRDSLPGPDGRARPLPAQQRWQAQLW
RALLADLQAAASPGESRGQIHQRFVHRLAESETWPELPQRLVVFGISSLPQQTLFALAAL
AEHLPVLILVLDPCSYYWGDIVTGHDLLRREARGRKRARQVADANAAIEHGHPLLAAWGK
TGRDYLAALEMTASELQLQVMDERIELFRPGATRTLLQQLQDDILFLRPASESRKLWPPI
DLTHDDSLRFHVAHGPLRELEVLQDQILEALRLDASLRPRDILIMVPELDTYAARIDAVF
GRYLGSDPRHLPYHIVDAPAVQQNSLLHALDLLLGLPQSRLPASMLWDLLEVAALRRRFG
IDVEDVPLLRSWLQTAGARWGLDDIQRQNLGLGREGQGAHTWWFALQRLLLGYAVAHGEA
CAELEPSYLPVDAAARLAPFIELLASISQWQTRLQTPATPKIWQGKLEELLAVFFAAQGE
EEQELLLAQGALQAWVEDCAGADLTVPLSLEIVGEAWRAAIAVKATRGSAFFSGGLTFAT
LMPMRAIPFRRIYLLGMNEKDYPRRQIPAAFDLLRGDYRPGDRSRREDDRYLFLEALLSA
RDALQIFWSGRSPRDDSEEPPSVLVAQLRDHLARVWRAEQSGEELHGKDLLAALTTSYPL
QAFSQQYLGENTSYFTFAREWWESDSVPAPETVLPVAERRYLTLRELQELGKRPARYFLQ
QGLGVRLRDSDEQIAEDCEPFALDSLQQWQIRSELIAAVQQEEVDAGGAMAVLQRQLLRQ
SRRGDLPAGAVGRLLGEELAHDLEQSLQRYLALAAQYADALPPQGLCLQHAGTELVGEIG
GLRRSAEGAHALLRWSASKIGRGKNIEWAKVWPHWIEHLALHTDGWAVSTHLLARDNSDI
LLAPMEPAWARAHLAELVELALEARRRPLPLLLPLLAAAWQGDAEGPIDLQFVRRQHADL
VQKDEEVRRVWPQPPLADDAAELTELCRRFLRPLQDAVERGAELRKQGDGKA
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcctcagctcaccctcgtccatagtcagcgcgcggaggatctgcgtgacttg
ttggtgcaatggtgtagccagcatcccctgtcgcccctcagccgcgagacgatcctggtg
caaagtaatggggtggcggagtggctgaagttgggctttgccgccgaggggattgccgcg
ggtctggatttcctgttgccagcgcagtttctgtggcgagcctaccgcgccgtgctggga
cgcgatgcagttccagacgcttcgccgttcgacaaggagcggctgcgttggcgacttttt
cgcctgttggcagagctgcacgatcccgtgtatgcaccgctgcatcgctatttgcagagg
gatccggaagggcgaaggcgctttcagttggccgaacgggtggcggatctctacgatcag
taccaggtctatcgcgccgactggctggtggcctgggaggctggccgcgacagcttgccc
ggtcctgatggtcgggcgcgtcctctgcctgctcagcagcgctggcaggcgcaactctgg
cgcgctctgctcgccgatctgcaggcagctgcaagccccggagaatcgcgcggccagatt
caccaacgattcgtccatcgtttggcggagtcagaaacctggccggaattgccgcagcgt
cttgtcgtcttcggcatctcttccctgccacagcagaccctctttgccctggccgcactg
gcggagcatttgccggtactgatcttggtgcttgatccgtgttcctattattggggggac
atcgttaccgggcatgatctgctgcgccgagaagcgcgcggccgcaagcgtgcgcgccag
gtggcggacgccaacgccgcgatcgaacatggacatccgctcctggctgcctggggcaag
accggtcgagactatcttgccgccttggaaatgaccgccagcgagctgcagttgcaggtg
atggacgaacgtatcgaactgttccggcccggcgcaacgcgcaccctcctgcagcagttg
caggatgacatccttttcctgcgcccggcatcggaaagtcgcaagctgtggccgcccatc
gatctcacccacgacgattccctgcgttttcatgtggcacatggtcccttacgagaactc
gaggtcctgcaggatcagattctcgaagccctgcgcctggacgccagcctgcgtccccgt
gacatcctgatcatggtaccggagctggatacctatgcggcgcgcatcgatgcggtcttt
ggccgctatctgggctcggacccgcggcatttgccctaccacattgtcgatgccccagcc
gtacagcaaaactcgctcctccacgccttggacctgctgcttgggttgccgcagtcgcga
ctgcccgccagcatgctctgggacctgctcgaggtcgccgccctgcgtcggcgctttggc
atcgacgtcgaagatgttcccctcctgcgctcctggctgcagaccgccggtgcccgttgg
gggctggacgatatccagcggcaaaatctgggcctggggcgggaagggcagggagcgcac
acctggtggtttgcgctccagcgtctcctgcttggctatgctgtggcccatggcgaggcc
tgcgctgagctggaacccagttatctgccggtggatgcggcagcgcgtctcgctcctttc
atcgagttgttggcaagcatttcccagtggcagacgcgcctgcagacccccgccacgccg
aaaatctggcagggcaaactggaggaactgctggccgttttttttgcagcacaaggagag
gaagagcaagaactgttgctggcgcaaggggctctgcaggcatgggtcgaagactgcgcg
ggagcggaccttacggtgccgctctcccttgaaattgttggcgaggcctggcgtgccgcc
atcgctgtcaaggcaacgcgcggctccgccttcttttccggtggtctcacctttgccacc
ctgatgcccatgcgtgccatccctttccgccggatctacctgctggggatgaacgagaaa
gactacccgcggcggcaaataccggcggcattcgacctcttgcgtggtgattatcgcccg
ggcgaccgctcgcggcgggaagatgatcgctatctctttctcgaagccttgctgtccgcc
cgcgacgcactgcagatcttctggtcgggacgcagcccgcgcgacgatagcgaggagccg
ccctccgttctggtggcgcagctgcgtgaccacctggcacgggtctggcgggcggaacaa
agtggtgaggagttgcatggcaaagacctgctggcggcactgacgaccagctatcccctg
caggccttcagtcagcagtatctcggcgaaaatacctcgtacttcacctttgcgcgggaa
tggtgggagtctgactccgtgccagcgccagaaacggtcttaccggtcgcggaacggcgc
tatctgaccctacgcgaactgcaggagttgggaaaaagacccgcgcggtatttcttgcag
caggggctgggtgtccgtctgcgcgacagcgatgaacaaatcgccgaggactgtgagccc
ttcgccctggattccctgcagcaatggcaaatccgcagcgagctgatcgcggcggtgcag
caggaggaagtggatgccggtggcgccatggcggtcctccagcgccagttgttgcgccag
tcgcggcgtggtgacctgcctgccggagccgttggccgcttgcttggtgaagaattggca
cacgacctggaacagtctctgcagcgctatctcgcacttgcggcacagtatgcagacgcg
cttccaccccagggtctgtgcctgcagcacgccggtacggagctggtaggagagattggc
ggtctgcgtcgcagtgccgaaggtgcgcatgccctgctgcgttggtcggccagcaagatc
ggcaggggcaagaatatcgaatgggcaaaagtctggccgcactggatcgagcatttagcg
ttgcataccgatggctgggccgtcagcacccatctcctggccagggacaatagcgatatt
cttcttgcgccgatggagcccgcctgggcgcgcgcgcatctcgcggagctcgtcgagctc
gcgctggaggcgcggcggcgaccgctgcccttgctgctgcccctgctggccgcagcttgg
caaggggacgcggaggggccgatcgatctccaattcgttcgccggcaacatgcagatctc
gtgcaaaaggacgaagaggtgcgacgggtctggccccagccgccgctggcagacgacgcc
gcggaactgacagagctttgccggcggtttctccggcctctgcaagatgccgtggaacgt
ggcgcggagctacgcaagcagggagacggcaaggcgtga
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