Acidithiobacillus sp. YTS05: MQE22_05245
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Entry
MQE22_05245 CDS
T08616
Name
(GenBank) 3'-5' exoribonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aciy
Acidithiobacillus sp. YTS05
Pathway
aciy03030
DNA replication
aciy03430
Mismatch repair
aciy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aciy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MQE22_05245
03430 Mismatch repair
MQE22_05245
03440 Homologous recombination
MQE22_05245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aciy03032
]
MQE22_05245
03400 DNA repair and recombination proteins [BR:
aciy03400
]
MQE22_05245
Enzymes [BR:
aciy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MQE22_05245
DNA replication proteins [BR:
aciy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MQE22_05245
DNA repair and recombination proteins [BR:
aciy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MQE22_05245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UTV82032
LinkDB
All DBs
Position
complement(1041773..1043194)
Genome browser
AA seq
473 aa
AA seq
DB search
MKDLASSLDRLLAELGQPIVCLDLETTGGRPQQDRILEIGMVTLAPGREPREWSQLLDPG
CAVSPYITQLTGIHPNMLRDMPRFEDIAASLALHLQGHILVAHNVRFDLAFLRQSFQRVE
IPFKAKAICSVKISRRLFPQETRHGLDAVIHRLEIPCRNRHRALDDARVVAEFLQRLADE
RCPELVQACKLQWEQECLPPNLDPEIIRSIPNRPGVYLFFGSNEIPLYIGKSIHLRKRVL
EHFRNDFRQDREMQIAQQVEHIEWIETPGELGALLLESRLVKEKNPLYNRQLRRKKALCT
IVWGGPGSATPQIHCGAAIRPGICHGIFANRRSAKAALKRLAQEWGLCDIRLGLQKGKGA
CFGFQIKRCRGVCTGQESTAEHDERLYAALQILQIQHWPFSGPIGIPEDDTGASIHVFDH
WCHMGILREDTGIVEKFTESASFDADTYRILLRHLNRSPQQWTSLDQDWDCRS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcttgcctcctcgctcgaccgcttgcttgctgaactcgggcaacccatcgtc
tgcctggacttggaaaccacgggcggacgcccccagcaggaccgcattctcgagatcggc
atggtgacgcttgcgccgggacgagagcctcgggaatggagtcagttactggatcccggt
tgtgctgtttccccctacatcacgcagttgaccgggattcaccccaacatgctccgcgac
atgccacgctttgaggatatcgctgcgagcttggcgctccacttgcaggggcatattctg
gtcgcccacaacgtacgcttcgaccttgcctttttacgccagtctttccaacgcgtcgag
atccctttcaaagcgaaggccatatgcagcgtcaaaatctctcggcgacttttcccccaa
gaaacgcgtcatggtctggacgccgtcattcatcgcctggaaattccctgccgtaatcgt
catcgtgccctggacgatgcgcgcgtcgttgcggaatttctccagcggcttgccgacgag
cgttgtcccgaactcgtgcaggcctgcaaactgcaatgggaacaggaatgtcttcctccc
aatctcgatccagaaatcattcgcagcattcccaatcggccaggggtctatctgtttttt
gggagcaatgagattcccttgtacattggcaaaagtattcacctgcgcaaacgagtactg
gagcacttccgtaatgatttccggcaggaccgcgagatgcagatcgcgcagcaggtggag
cacatcgaatggatagaaaccccaggcgagttgggtgcactgctactggaatcacgcctg
gtgaaagagaaaaatcctctctataaccgccagctgcgcagaaaaaaggcgctttgcacc
attgtttggggcggcccagggagcgcaacaccacagatccactgcggcgcggcgattcgg
ccaggcatctgccacgggatattcgccaatcgccgcagtgcgaaagccgcactcaagcgc
ctggcacaggaatggggactttgcgatattcgcttgggattgcaaaaaggcaaaggcgct
tgttttggcttccagatcaaacgctgtcgtggcgtatgtaccggccaagaatccacggcg
gagcatgatgaaagactgtatgccgccctgcaaattttgcaaatccagcactggccattt
tccggacctatcggtattcccgaagacgacaccggcgcctccatccatgtttttgatcac
tggtgccatatgggaatcttacgagaagataccggaatagtagaaaaattcacggaatca
gccagcttcgatgcggatacctatcgcatattactccgccacctcaatcgctctccgcaa
caatggacatctttggatcaggattgggactgtcgatcataa
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