Acidithiobacillus sp. YTS05: MQE22_10170
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Entry
MQE22_10170 CDS
T08616
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aciy
Acidithiobacillus sp. YTS05
Pathway
aciy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aciy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MQE22_10170 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aciy03019
]
MQE22_10170 (pnp)
03016 Transfer RNA biogenesis [BR:
aciy03016
]
MQE22_10170 (pnp)
Enzymes [BR:
aciy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MQE22_10170 (pnp)
Messenger RNA biogenesis [BR:
aciy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MQE22_10170 (pnp)
Transfer RNA biogenesis [BR:
aciy03016
]
Prokaryotic type
tRNA degradation factors
MQE22_10170 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
OB_PDCD11
CCDC122
S1_TP0910
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
UTV82349
LinkDB
All DBs
Position
complement(2065954..2068026)
Genome browser
AA seq
690 aa
AA seq
DB search
MRKEVQFGGRTLVLETGRMARQADGAVLVSSGDSVVLVTAVGRRDLKPGQDFFPLTVNYQ
EKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPKGFMHEVQVIATVLSVDGEQ
DPDILAMIGSSAALAVSGIPFDGPIGAARVGYRDGEYLLNPSFAELQGSELDLVVAGTES
AVLMVESEAKGLSEKVMLEAVMFGHASFQPVIATINELAAATGKERWDWQAPSKDAELHA
AVVAEARDALQAAYQLMEKQARSKRLEEVRAATVAALAAEDASRVDAVRAALKSIETEIV
RGRVLDGAPRIDGRDRFTVRPISIEVGVLPRTHGSALFTRGETQALVTATLGTKSDEQIV
DALHGESRDRFLLHYNFPPFSTGETGMVGSPKRREIGHGRLAKRAIAAVLPSESEFPYSL
RVVSEILESNGSSSMASVCGASLALMDAGVPLRAPVAGVAMGLIKEGERFAVLTDILGDE
DHLGDMDFKVAGTESGVTALQMDIKIQGITREIMAQALEQALAGRLHILGLMKDVLDHGR
ETLSQHAPRIISIRINPDRIRDVIGPGGKIIRALTEETGATVDIQDDGLVTIASVDGASG
EEAKRRIQLLTADVEVGVIYDGKVAKIMDFGAFVTILPGRDGLLHISQISAERVNDVHDY
VKEGQTVRVKVLEVDRQGKIKLSMKDIPQS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtgcggaaagaagtgcaatttgggggccggacgctggtcctggaaacgggacggatggct
cgccaggccgatggcgcggtgttggtcagcagcggcgatagtgtggtgctggtcactgcg
gtagggcggcgcgacttgaagccaggccaggatttctttccgctgacggtgaattatcag
gaaaagacctacgctgcagggaagatccccggcggctttttcaagcgggaagggcgcccc
tccgaaaaggaaacgctgacttcccgtcttatcgaccgcccgattcgtccgctctttccc
aagggattcatgcacgaagtgcaggtgattgctacggtcctctcggtcgatggcgaacag
gatcccgatatcctggccatgattggcagctcggcggctttggctgtttccggtattccc
ttcgacggtcccatcggcgccgcacgcgtcggctatcgggacggcgagtatctgctcaat
ccgagctttgcagaactgcagggctcggagctcgatctagtggtggctggcacggagtcg
gcggtgctgatggtggagtccgaagccaagggtctgtccgaaaaggtcatgctcgaggct
gtcatgtttggccacgccagctttcagcccgtcatcgctactatcaatgagctggcggcg
gcgaccgggaaggagcgctgggattggcaggcgcccagcaaggatgcggagttgcacgcc
gccgtggttgccgaggcgcgcgatgccctgcaagcggcctatcagctgatggaaaagcag
gcacgcagcaagcgcctggaagaagtccgtgcggccacagtcgctgctcttgcagcggag
gacgccagccgcgtcgatgccgtgcgcgctgcgctgaaatcgatcgagaccgagatcgtc
cgcggtcgggttctcgacggtgccccgcgcatcgatggacgcgatcgtttcaccgtgcgt
cccatcagcatcgaagtcggcgtgttgccccgcacccatggttcggcactcttcacgcgt
ggcgagacccaggccctggtgacggccaccctcggcaccaagagcgacgaacagatcgtc
gatgctctgcacggtgaaagtcgcgatcgcttcctgctgcactacaactttccgccgttc
tctactggtgaaacgggcatggtgggttcgcccaagcggcgggaaattggccatggacgc
cttgccaagcgtgccatcgctgcggttctgccgtccgaatcggagtttccctatagtctt
cgggtggtttcggaaatcctggaatccaacggttcttccagcatggcatcggtctgcggc
gcctctctggcgctgatggatgccggggttcccctgcgggcgccggtcgccggtgtggcc
atgggcttgatcaaggaaggcgaacgttttgcggtcttgaccgatatcctcggcgacgaa
gatcatctgggagacatggatttcaaggttgcaggcacggaatccggcgttacggccctg
cagatggacatcaagattcagggtattacccgcgagatcatggcgcaggcgctggagcag
gccttggctgggcgtttgcacattctcggcttgatgaaggatgtgctcgaccatgggcgg
gaaaccctgtcccaacatgcaccacgcatcatcagcatccgcatcaatccggatcgcatc
cgagacgtgattgggccgggcggcaagatcatccgcgcgctgacggaagaaacaggagct
accgtcgacatccaggacgatggtctggtgaccattgcctccgtcgacggggcttccggg
gaagaggccaagcggcgcattcagctccttaccgctgatgtcgaggttggcgtgatctat
gacggtaaggtggcgaagatcatggacttcggtgccttcgttacgattctgcccggtcgc
gatggtctgttgcacatctcgcaaatcagcgccgaacgcgtcaatgacgtgcacgactac
gtcaaggaagggcaaaccgtgcgcgtcaaggttctggaggtggaccgccagggcaagatc
aagctgagcatgaaggatatcccccaatcctga
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