Acinetobacter sp. Tol 5: TOL5_12340
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Entry
TOL5_12340 CDS
T11084
Symbol
rnc
Name
(GenBank) RNase III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
aciz Acinetobacter sp. Tol 5
Pathway
aciz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aciz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TOL5_12340 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aciz03019
]
TOL5_12340 (rnc)
03009 Ribosome biogenesis [BR:
aciz03009
]
TOL5_12340 (rnc)
03036 Chromosome and associated proteins [BR:
aciz03036
]
TOL5_12340 (rnc)
Enzymes [BR:
aciz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
TOL5_12340 (rnc)
Messenger RNA biogenesis [BR:
aciz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TOL5_12340 (rnc)
Ribosome biogenesis [BR:
aciz03009
]
Eukaryotic type
90S particles
RNase
TOL5_12340 (rnc)
Prokaryotic type
rRNA processing factors
TOL5_12340 (rnc)
Chromosome and associated proteins [BR:
aciz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
TOL5_12340 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BCX73034
LinkDB
All DBs
Position
1372006..1372698
Genome browser
AA seq
230 aa
AA seq
DB search
MIKGQLKVSDLRLQSRIGYQFKQPELLQLALTHRSVSHKHNYERLEFLGDSLLGMIIANY
LYNAYPHENEGRLTRMRATLVRQEALGKIANDLKLSQSLILSTGELKSGGHHRESILADT
VEAIIGAIYTESQDLPLLESIVLKWYEPYLDHIEPTDQLKDPKSRLQEYLQARKKHLPVY
EVVDIQGDAPNQHFKVECTIDGLPKMMGEGSSRRFAEQAVAADFLKLLEQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaaaggtcagttgaaagtaagtgatcttcgcttacaaagtagaatcggttaccag
tttaaacaacccgagttattacaactcgcgctgactcatcgttcggtgagtcacaaacac
aactatgagcgtctagagtttctgggtgactcattgttggggatgatcatcgcaaattac
ttatataatgcctatccgcatgaaaatgaagggcgtttaacccgtatgcgtgcaacttta
gtgcgtcaagaagcgttgggtaagattgccaatgacttaaaattaagtcaaagtttaatt
ttaagtacaggtgaattgaaatctggcggtcatcatcgtgagtcaatattggcagatact
gttgaagcgatcattggggcgatttatacagaaagtcaagatttacctttgttggaatcc
attgttctgaaatggtatgaaccttatttggatcatatcgaacctacagatcagttaaaa
gacccgaaatcacgcttacaagagtatttacaagcccgtaaaaaacatctccctgtttat
gaggtggttgatattcaaggtgatgcacccaatcaacattttaaagtagaatgtactata
gatggcttacctaaaatgatgggtgagggatcgagtcgccgttttgcagaacaggcagtc
gcggcggattttttaaagctattggagcagtaa
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