Acinetobacter sp. Tol 5: TOL5_17040
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Entry
TOL5_17040 CDS
T11084
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aciz Acinetobacter sp. Tol 5
Pathway
aciz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aciz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOL5_17040 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aciz03019
]
TOL5_17040 (rhlB)
Enzymes [BR:
aciz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TOL5_17040 (rhlB)
Messenger RNA biogenesis [BR:
aciz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TOL5_17040 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrA_inter
Toprim
Glyoxalase
Utp25_C
Cas3-like_C_2
BTRD1
Motif
Other DBs
NCBI-ProteinID:
BCX73504
LinkDB
All DBs
Position
1902368..1903519
Genome browser
AA seq
383 aa
AA seq
DB search
MSSGFETLNLHPQLKQAIDALGFKEMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLVS
IINDLLNNPIQTQRFRGEPRALILAPTRELAIQIENDAKDLVKYSGLNVVTLVGGVDFDK
QRKQLDQGFVDILVATPGRLIDFTEQKEIWLDQIEFLVIDEADRLLDMGFIPSVKRIVRF
SPRKEQRQTLMFSATFSYDVLNLAQQWLFEPVTVEIEPEKKTNADVEQRVYVVEKKDKYK
LLREILTDEPIEKVMIFANRRDQVRKLYDHLKADGYKVVMLSGEIAQDKRLKMLDQFKNG
KHNIMIATDVAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGTQGVSISFLSEDDA
FNLPTIEKAIGQKLPLTRLEGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaggtttcgaaacccttaatttacatccgcaacttaaacaagcgattgatgct
ttagggtttaaagaaatgacccccatccaacaaaaagtattgaagtatactttggcaggt
catgatgcaattgggcgtgctcaaacaggtactggaaaaacagcagcattcttagtcagt
attattaatgatttgctcaataatccgattcaaacacagcgttttcgtggtgagccacgt
gctttgattcttgcacctacacgagagctggcgattcaaattgaaaacgacgccaaagat
ttggtgaaatatagcggtttaaatgtcgtcactttggtcggtggtgtagattttgacaag
cagagaaagcagttggatcaaggttttgttgatattttagtcgcaacaccagggcgttta
attgattttactgaacaaaaagaaatctggttagatcaaattgagtttttagtcattgat
gaagctgaccgtttattggatatgggctttatcccttcagtaaaacgcattgtgcgtttt
tctccacgtaaagaacaacgtcaaactttaatgttttcagctacttttagttatgacgta
cttaatcttgcacaacaatggcttttcgaacctgtcactgtagaaattgaacctgaaaag
aaaaccaatgctgatgttgagcaacgcgtttatgtggtcgaaaagaaagacaaatataag
ttattacgtgaaattttaacggatgaaccaatcgaaaaagtgatgatttttgcgaatcgt
cgtgatcaggtccgtaaattgtatgatcatttgaaggcggatggttataaagtggtcatg
ctgtctggcgagattgcacaagacaagcgtttgaaaatgctagaccaatttaaaaatggt
aaacataacatcatgatcgcaacagatgttgcaggtcgtggtattcatgtagatggtgta
tcgcatgtgatcaatttcacgctacctgaacagtctgatgattatgtacatcgtattggg
cgtactgggcgagctggaacacaaggggtaagtattagtttcttgtcggaagatgatgcc
tttaatttgccaacgattgaaaaagccattggacagaaattacctttgacccgtttagaa
ggttattgctaa
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