Acinetobacter sp. Tol 5: TOL5_30400
Help
Entry
TOL5_30400 CDS
T11084
Symbol
dnaQ
Name
(GenBank) ribonuclease H
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
aciz Acinetobacter sp. Tol 5
Pathway
aciz03030
DNA replication
aciz03430
Mismatch repair
aciz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aciz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TOL5_30400 (dnaQ)
03430 Mismatch repair
TOL5_30400 (dnaQ)
03440 Homologous recombination
TOL5_30400 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aciz03032
]
TOL5_30400 (dnaQ)
03400 DNA repair and recombination proteins [BR:
aciz03400
]
TOL5_30400 (dnaQ)
Enzymes [BR:
aciz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TOL5_30400 (dnaQ)
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
TOL5_30400 (dnaQ)
DNA replication proteins [BR:
aciz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TOL5_30400 (dnaQ)
RNase H
TOL5_30400 (dnaQ)
DNA repair and recombination proteins [BR:
aciz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TOL5_30400 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
Rv2179c-like
DNA_pol_A_exo1
ATG29_N
Motif
Other DBs
NCBI-ProteinID:
BCX74840
LinkDB
All DBs
Position
3293668..3295083
Genome browser
AA seq
471 aa
AA seq
DB search
MSQTITLYVDGACKGNPGPGGWGAYIITETEEHKLCGGELDTTNNRMELSAAIEGISFCP
TEAKLIIWTDSNYVKRGITEWIEGWKKKNWKDVKNPDLWQKLDRVCRGREIEWNWIKGHA
GHAGNEMADQLANLGTEQTLAAKNTKVPQSATEQSVENNDKKKDEKDWLLDDPFGFDLME
SDETIDTELPTPKQTVTSSETPNNNLRHEDVVEQVEQSTQMKDMNIHPQIVITPATIKLH
GPKQFILDTETTGFYYQDSDRIVEVGAIEMVNRKLTGSSIHIYINPGKPVGESEAIHGIT
DEFLKDKPKYEEIAEVLFDYLKGSEIIAHNASFDMNFLDMEFKRSGLPALSEVCTVTDTL
AMAKSKHPGQKNSLDALVRRYEIVQRDRTFHGALLDAEILADVYLAMTGGQVSFDMDAIS
AHTEQAQGNTTRQKIEIDVPVIYASDEELEAHENWVNKYQEKHGEACIFAK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaacaatcacactttatgtcgacggtgcttgtaaaggcaacccaggtcctggt
ggctggggtgcttatatcatcactgaaactgaagagcataaattgtgtggtggtgagctg
gataccaccaataatcgtatggagctgagtgctgctattgaaggcatttcattttgccct
acagaagcgaaactgattatttggaccgactccaactatgtgaagcgcggtattaccgaa
tggattgaaggttggaaaaagaaaaattggaaagatgtcaaaaatcctgatttatggcaa
aaactggatcgcgtatgtagaggtcgtgaaatcgaatggaattggattaaaggtcatgca
ggtcatgcaggcaatgaaatggctgatcaattggcaaacttaggtacggaacaaacattg
gcagcaaaaaacacgaaggtgcctcaatcagccaccgaacagagtgtagaaaataatgat
aaaaaaaaagatgaaaaagactggttgcttgatgatcccttcggatttgacctgatggaa
tccgatgaaactatcgatactgaattgccaacacccaaacaaactgtgacaagctctgaa
acaccaaataataatttgcgccatgaagatgtagttgaacaggttgaacaaagtactcaa
atgaaagatatgaatattcacccgcaaattgtgattacacctgcgaccataaaactgcat
ggacctaaacagtttattcttgataccgaaaccacaggtttttattatcaggacagtgat
cgaattgttgaagttggtgcgattgaaatggtcaaccgtaaactcacaggcagttcgatt
cacatctacattaatccaggaaaacctgtaggtgagtcagaagccatccacgggatcact
gatgaatttttaaaagacaaacccaagtatgaggaaattgcagaagtcctattcgactac
ttaaaaggcagtgaaatcattgcacataatgcaagcttcgatatgaacttcttggatatg
gaattcaaacgcagtggtcttcctgccctgtctgaagtgtgtacagtgactgatacttta
gcgatggctaaaagtaagcatcccggacaaaaaaactctttagatgcacttgttcgacgt
tacgaaattgttcaacgtgatcgtactttccacggcgcattgctcgatgctgaaatttta
gccgatgtttatctcgcaatgacaggcggacaagtatcctttgacatggatgctatttct
gcacatactgaacaagctcaggggaatacaacacggcaaaaaattgaaattgatgttcca
gtaatttacgcttcagatgaagaattggaagcacatgagaactgggtcaataaatatcaa
gaaaaacatggggaagcctgcatttttgcaaaataa
DBGET
integrated database retrieval system
