Acinetobacter sp. Tol 5: TOL5_33310
Help
Entry
TOL5_33310 CDS
T11084
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aciz Acinetobacter sp. Tol 5
Brite
KEGG Orthology (KO) [BR:
aciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aciz03400
]
TOL5_33310 (sbcC)
DNA repair and recombination proteins [BR:
aciz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TOL5_33310 (sbcC)
Archaeal homologous recombinant proteins
TOL5_33310 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
MMR_HSR1
AAA_21
Motif
Other DBs
NCBI-ProteinID:
BCX75131
LinkDB
All DBs
Position
3617176..3620772
Genome browser
AA seq
1198 aa
AA seq
DB search
MKILSIRLKNLASLSGEHFIDFESEPLASAGLVAIVGKTGAGKSTILDAMCLALFNKIPR
LKDSDGKLQDVDGSELLTNSPLTVLRRGTAHGFAELCFVAQDQKHYLARWELKRSREKAD
GKLQSVQRYLKCLTDGTVIADKAKAVDNSIYKITQLSFEQFTRAVLLAQSEVTAFLKARD
NERGELLEYLTNSAIFGKIGQLAYEKTKLVASKRKELENLLGHIELLSDEDLAELSTQFQ
HIENTYQKLQSEKIQLEKQQLWFERKQKLDQEIILKQQFLDAQLKVQHDLRPERERLIRL
EKFSSIRSSVFQQQQLNKNEQQLTPQLQKQQQLFDQLKLQFEQQKQNFTQAETALNDIQS
FENAHFDALKEVRKCIQERDFIGTEFKKIQSKLNELEQSKHPLLSQQQEVEQHIQRLSQQ
QLNLSQKLVETQQFSSLDKGLTAHIQQLSQFIQHYPSVENQLGNLSQAEDKLRQQNAQLQ
ALIDQSGTIEKLETRLEQTRQQRETTLYQLNQFDIIQQKLQQFFELQSESQQLIAQIHQG
HTQFQQLEKATVQAEQDYHNAKQARTKLQDILQQQRLLHTENVENLRAALKEDQPCIVCG
STTHPYKMDDSIVSKALFELQQQQEQQALLQEQDTFNIWQLSQQNLTQFNAEQEQLKTSQ
KRLVERIAVTQQTCAEQIASAKIKLDLTQTQAEIMLELGQFTQQSQQQIEQIDQQSKQSI
QTIKTQQQLLQSTQHTSHLLQQAKNLQHQIQHIVSCLSEQEQHMWQQQTVATAENVCIRL
KQRAQQLDQQEQHSKQLDLYAQQQHSIQLNLDNISKQIADTTQSLAEIKLKGLQNTETAN
QLIYSMTGLNEVKPNEWLAQHDLKRQQSQQHYQQLKQNFEQLRNQFEQEKSQLEQLKAQL
TQNLNHLNQVQFEIQQWLTEHPDFQLEDLSNLAQITPPQEQQIRKQLQQAERTLNEAHSA
LKTIQEQLSEHLTLQPEIVSNELQQLMIRNSEALNTQIEIRDQLKLKLELHQQNVMKQKQ
FADQIHNVQQEEHRWGKISGLMGDATGKKFRDYAQQYNLDILLEHANQQLAMLSQRYTLK
RLENSLSLAIIDHDMDGETRSVASLSGGESFLTALALSLAIANMASGSMKIESLFIDEGF
GTLDASSLHMVMNALDQLQNQGRKVVLISHIQEMHERIPVQIQVRALGAGASTIEVVS
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattttatcgatacgactcaaaaatctagcttcgttgtctggtgaacattttatt
gattttgaatctgaaccattggcttcagctggtttagtcgcaattgttgggaaaaccggg
gctggaaagtccactattttggatgcgatgtgtcttgccttgtttaataaaatcccacgt
ttaaaagacagtgatggtaagttacaagatgtggatggttcagaacttttaaccaactcc
ccactgactgtgctgcgtcgaggtaccgcgcatggctttgcagagctttgttttgttgca
caagatcaaaaacattatctggctcgttgggagctaaaacgttcacgtgaaaaagcagat
ggaaaactgcaaagtgtacaacgttatttaaaatgtctgaccgatggaacagtgatagcg
gataaagccaaagctgtagacaacagtatttataaaattactcaattgagtttcgaacaa
tttacccgtgctgtacttttggcacaatctgaagtcacagcatttttaaaagcacgtgat
aatgaacgtggtgagttactcgagtatttaaccaattcagcaatttttggaaaaattggt
caattggcatatgaaaaaaccaagttggtggcttcaaaacgtaaggaacttgaaaaccta
ctgggtcatattgaactgttatctgatgaagatttggctgaactgtcgactcaatttcaa
catattgaaaacacctatcaaaaattacaatcagaaaaaatccagcttgaaaaacaacag
ctttggtttgaacgtaaacaaaaattagatcaagaaattattctgaaacagcaattttta
gatgcccaactcaaagtacaacacgacttacgacctgaacgtgaacgtttaattcgttta
gaaaaattttcgagtattcgctcaagtgtttttcaacagcaacagctgaataaaaatgaa
caacaactgacaccacaactgcaaaaacaacaacaactgtttgatcagttaaagctacaa
tttgagcagcaaaagcaaaacttcactcaagctgaaacggctttaaatgatatacaaagt
tttgaaaacgcacattttgatgctttaaaagaagtacgtaaatgtatccaagaacgtgat
tttattggtacagaatttaaaaaaattcaatccaaactcaatgaattggaacaatcaaaa
catcccttactaagccagcaacaggaagttgaacaacatattcaacgccttagccaacag
cagcttaatttaagtcaaaaacttgtcgagacacaacaattttcaagtctggataaaggc
ttgacagcgcatatacaacaactcagtcaatttattcaacactatccaagcgtcgaaaat
caactcggtaatttaagccaagctgaagataaactcagacagcaaaacgctcaattacag
gctttaattgatcaatcaggtacgatcgagaagctagaaacaaggcttgaacaaacccgc
caacaacgtgaaacgacactttaccaactcaatcaatttgacatcatccaacaaaaatta
cagcaattttttgaattacagtcagagtctcaacaacttattgctcaaattcatcaaggt
catacacaatttcaacaactagaaaaagccacagttcaagctgaacaagattatcacaac
gcaaaacaggctcgaaccaagctacaggatatacttcaacaacaacgcttattacataca
gaaaatgtcgagaatttaagagcagcacttaaagaagatcaaccatgtattgtctgtgga
agtactacccatccctataaaatggatgattccattgtttccaaagccttgttcgaacta
caacaacaacaagaacagcaagctctgcttcaagagcaagatacttttaacatttggcag
cttagtcagcagaatttaacccaattcaatgcagagcaagaacaactaaaaacctcgcaa
aaaagattggttgaacgaatcgcagtcactcaacagacttgtgctgaacaaattgcgtct
gcaaaaattaagcttgatctcactcaaacacaagctgaaatcatgttagagttaggtcaa
tttacccaacaatctcaacagcagattgagcaaatcgaccaacagtccaaacaatcgatt
caaacgataaaaacccaacaacaattgttgcagagcactcagcacacatcacatttatta
caacaagccaaaaaccttcagcatcaaattcagcatatcgtttcatgcttgtctgagcag
gaacaacacatgtggcaacaacagacagtcgccaccgcagaaaatgtttgtatccgttta
aaacaacgtgcgcaacaacttgatcaacaggaacaacacagtaagcaattagatttatac
gcccaacaacaacacagtattcaactcaacctagacaatatctccaagcaaattgctgat
actactcaaagcttagcggagattaaacttaaaggattacaaaatacagaaactgcgaat
caattgatttacagcatgactggattaaatgaagtgaagccgaatgaatggttagctcag
cacgatctgaaacgccagcaaagccaacaacattatcagcaactcaaacaaaactttgag
caattgcgtaatcaatttgaacaagaaaagagccagcttgaacagctcaaagctcagctc
acccaaaatctaaatcatctcaatcaagtgcagtttgaaatccaacaatggttaacagaa
catccagattttcaattagaagatttaagcaacttggcgcaaattacaccaccacaagaa
cagcaaattcgaaagcaattacagcaagctgaacgcacattgaatgaagcccattcagca
ctcaaaaccattcaggaacaactctcagaacatctaacgcttcaaccagaaatagtgagc
aatgagttacaacaattgatgataagaaatagtgaagcgctaaacacgcaaattgaaatt
cgagatcaactcaaactcaaactcgaattacatcagcagaatgtcatgaagcaaaaacag
tttgcagatcaaattcacaacgtccagcaagaagaacatcgttgggggaaaatttcaggt
ttgatgggggatgcaacaggtaaaaaatttagagattatgcgcaacagtataatttggat
attttacttgaacatgccaatcagcaattggcgatgctgtctcaacgctatacgcttaag
cgtctcgaaaactctctaagtctcgccattattgatcatgatatggatggtgaaactcga
tctgttgcttcactatcgggtggcgagtctttcttaacagcgctggcgctctctctagca
attgccaatatggcttcaggttcaatgaaaattgaatccttatttattgatgaaggtttt
ggaacactggatgcttcatcattacatatggtaatgaatgctttggatcaactgcaaaat
caagggcgtaaagtcgtactaatttcacatatacaggaaatgcatgaacgtattcctgta
caaattcaagtccgagctttaggtgcaggtgccagtacgatagaagtagtcagttaa
DBGET
integrated database retrieval system
