Acinetobacter sp. Tol 5: TOL5_36440
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Entry
TOL5_36440 CDS
T11084
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aciz Acinetobacter sp. Tol 5
Pathway
aciz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aciz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOL5_36440 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aciz03019
]
TOL5_36440 (pcnB)
Enzymes [BR:
aciz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
TOL5_36440 (pcnB)
Messenger RNA biogenesis [BR:
aciz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TOL5_36440 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF3381
Motif
Other DBs
NCBI-ProteinID:
BCX75444
LinkDB
All DBs
Position
complement(3987988..3989478)
Genome browser
AA seq
496 aa
AA seq
DB search
MQTLRASKCGLSTAQLPSSILDVIDSLTKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNAT
PSQVKEVFGRRCRIIGRRFELAHVYSGRELIEVATFRAPPKKAITSAQGMILRDNNWGTI
EQDFARRDFSINAMYYQPRKGEVLDFCNAIDDIKTKTLRLLGDPTLRFEEDPVRMLRTLR
FAAKLNFSIDPKILKIFTQEMTQLLRDVSPHRLYDESQKLFTMGHLHRVMPMLIEFGIWK
QLFADISPEITQFMERAAKNTDQRIQIGKTINPAFFYAVLLWNNFLARCDFYQAKGVVAA
EARAQAGLDVLKRQATRTIIPRFAETFIREVWEMQTRLLNPKPQQIEALSGHARFRAGFD
FLLLREKSGDSTTNGMGAWWEAYQTMSSDEKERAISSYNRQRAKSRKKLAESPVVEEVKT
VSTEIEPLVKEQESRSRRSRQKANASHTPSAASHDFKSRNDSRAAVNKGEITADHPITKR
RRVQRDLSKVIFGPTQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaactttgcgtgcgtcaaagtgtggattatccaccgctcaattaccttcttccatt
ttagatgttattgattctttaaccaaagctggctatgaggcttatatagtcggtggaggt
gtgcgtgatttaatgctcggcttaaatccgaaagacttcgatgctgtgaccaatgcaacg
ccatcgcaagtcaaagaagttttcggtcgtcgttgtcgaattatcggtcgacgttttgaa
ttggcacatgtctattctggtcgtgaattgattgaagtcgcaacatttcgtgccccaccc
aagaaagcgatcacttcggctcaaggcatgattctgcgtgataataactggggaaccatc
gagcaagattttgcacgtcgcgatttttctatcaatgcgatgtattatcagccacgtaag
ggtgaagtgcttgatttttgtaatgccattgatgatataaaaaccaaaactttaagatta
ttgggtgatccgactctacgttttgaagaagatcctgtacgtatgttgcgtacattgcgt
tttgcggcaaaattaaatttcagtatcgatcctaaaattttaaaaatttttacccaagag
atgactcagctcttgcgtgatgtttctccacaccgtttatacgatgaatcacaaaaacta
ttcacgatgggacatttacatcgtgtcatgccaatgttgatcgagtttggtatttggaaa
caattatttgctgatattagccctgaaattactcaatttatggagcgtgcagcaaaaaat
actgaccagcgaattcaaattggcaaaaccatcaatcctgcttttttctatgccgtgtta
ctttggaacaattttttagcacgttgtgatttttatcaggctaaaggtgtagttgcggca
gaagcccgtgcacaagcaggtttggatgttttaaaacgacaagcgacgcggaccattatc
cctcgatttgcggagacgtttatccgtgaggtttgggaaatgcagacacgtctgttaaat
ccaaaaccgcaacaaattgaagcgctgtcagggcatgcgcgtttccgtgctggatttgac
tttttactgttaagagaaaagtctggtgattcgacgaccaacggtatgggggcttggtgg
gaagcttaccaaaccatgtctagtgatgaaaaagagcgtgcaatcagtagttataatcgc
caacgagctaaaagccgtaaaaagttagctgaatctcctgttgttgaagaagtgaaaact
gtttcaaccgagattgaaccgctagtcaaagaacaagagtcacgtagtcgccgttctcgt
caaaaagccaatgctagccatacaccatctgcagcatcacatgattttaaaagcagaaat
gacagcagagcagcagtcaacaaaggtgaaattacagcggatcacccgatcaccaagcgt
agacgtgtacaacgtgatttgagcaaagtgatctttggaccaacgcaatga
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