Aeropyrum camini: ACAM_0242
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Entry
ACAM_0242 CDS
T02858
Name
(GenBank) DNA repair helicase Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
acj
Aeropyrum camini
Pathway
acj03022
Basal transcription factors
acj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ACAM_0242
09124 Replication and repair
03420 Nucleotide excision repair
ACAM_0242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acj03021
]
ACAM_0242
03036 Chromosome and associated proteins [BR:
acj03036
]
ACAM_0242
03400 DNA repair and recombination proteins [BR:
acj03400
]
ACAM_0242
Enzymes [BR:
acj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ACAM_0242
Transcription machinery [BR:
acj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ACAM_0242
Chromosome and associated proteins [BR:
acj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
ACAM_0242
DNA repair and recombination proteins [BR:
acj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ACAM_0242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
Phage_lambda_P
Motif
Other DBs
NCBI-ProteinID:
BAN89711
UniProt:
U3TBB7
LinkDB
All DBs
Position
complement(230404..232272)
Genome browser
AA seq
622 aa
AA seq
DB search
MSDSGETAFPYGSWRKGQRELAEEVRRSVSEGEILVASAPTGFGKTAAVIYGLLSAGVER
VLYLVRTVNEIDPVVRELKRFGARFTFLFSARRMCPLMSVEGILPSEEDFWGNCRIARAK
GACRYYEKLAETDEAEVAEYVRGHPAISAYRLAWDIAKFKGVCPFFALKGLVEESQFVVA
TYPYLFKEDIFRSFLEPHDYDDFVAVVDEAHSLLNIHSLLEYRVSLKDLELALREVREYA
PSAKDFISWLERTSKTASGLRVSRITLLDKQPFLEGLDDLAVVEDIVETIRARKAEEALS
LSGPSGIGRVKTSTSKIHSWLSVLSREDSYLFAEKDENRLVWLIATPLDPSRVVKEPLER
VKAAVLLSGTMPSPKLYLKVLGVSRSFRIVDAGLMYGVRGFGRFFTIVAADVTTAYRSRG
DSMYRLIASRIALADRLLPGLKLAVYPSYEVMYRVVERLPADVETIVETRGISLDEVEAR
ILTRDPGERIVINAVAGGKLVEGVEFVDYEGKNLLSTVIIVGVPFPQPDDYTRKHLEVMA
SRIGLSDAKKLVYLVNPIIKVRQALGRSIRGPDDRALYILMDYRYLRRDLKEVLGIPYHR
VVKGAEDFEEALRTAKSRVLGV
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgacagtggagagacggcctttccatatggaagctggaggaaggggcagagggag
cttgcggaggaagttaggaggtcggtttcagagggggagattcttgtagcaagcgcgccc
accggttttgggaagacggctgctgtgatctacggactcctctcagctggtgtcgagagg
gttctctaccttgtgcgtactgtgaacgagattgaccctgttgtgagggagcttaagagg
tttggggctaggttcacattcctgttcagcgctaggcgcatgtgccccctcatgtcggtg
gagggtatcctaccctctgaagaggatttctggggcaactgcaggatagccagggcaaag
ggggcttgcaggtattacgagaagctcgccgaaacggatgaggccgaagttgccgagtac
gtcagggggcaccccgcgataagcgcatacaggcttgcgtgggatatagcaaagttcaag
ggtgtatgtcccttcttcgcgctgaaggggctggttgaggagagccagtttgtagtggcc
acctacccctacctcttcaaggaggacatattcaggtctttcctggagccccacgactat
gacgacttcgttgccgtggtggacgaggcccatagcctcctcaacattcacagcctcctc
gaatacagggtgtccctaaaagacctggagctggccctcagggaggttagggagtatgcc
ccctcagccaaggatttcatatcgtggctcgagaggacgtctaaaacggcctccgggctt
agagtttcgagaataactctgctcgataagcagccgttccttgaagggcttgacgatcta
gctgttgtcgaggacattgtcgagaccataagggctagaaaggctgaggaggctctctcg
ctctccgggccatcaggcatagggagggtgaagacctccacatcaaaaatacattcatgg
ctctcagtcctgtcgagggaggattcttacctcttcgccgagaaggatgaaaacaggctc
gtctggcttatagccacacccctagacccctccagggttgttaaggagccgctggagagg
gtgaaggcggcggtgctcctgagcggcaccatgccctctcccaagctctacctaaaggtc
ctaggggtctccaggagcttcagaattgtggacgcaggcctgatgtacggtgtaaggggg
ttcggcaggtttttcaccatagttgcggccgacgtcacaacggcctacaggtctcgggga
gactccatgtacaggcttatagcgtctaggatagctttagctgacaggctgctacccggg
ctaaagctagcggtgtacccgagttatgaggtgatgtacagagttgtggagaggctgcct
gctgacgtagagactatagtggagacgagggggataagcctggacgaggttgaggcgaga
atactcaccagagatccgggagagaggattgttataaatgcggtggctggcggcaagctg
gtggagggggtggagttcgttgactacgagggaaagaacctgctgtcaactgtcatcatt
gttggagtccctttcccccagccagacgactatacgaggaagcatctggaggtcatggcg
tctaggatcggcctatccgacgctaagaagcttgtctaccttgtcaaccccattataaag
gttaggcaggcccttgggagaagtattaggggtcctgacgatagggctctctacatactc
atggactacaggtatttgaggagggatttgaaggaggtcctcggcataccctatcaccgt
gttgtcaagggtgctgaggattttgaggaggcgttgaggacggccaagtctagggtgcta
ggagtctaa
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