Aeropyrum camini: ACAM_0325
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Entry
ACAM_0325 CDS
T02858
Name
(GenBank) exosome complex RNA-binding protein Cs14
KO
K07573
exosome complex component CSL4
Organism
acj
Aeropyrum camini
Pathway
acj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACAM_0325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acj03019
]
ACAM_0325
Messenger RNA biogenesis [BR:
acj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ACAM_0325
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
ACAM_0325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
Zn_ribbon_NUD
Zn_Tnp_IS91
Cas12f1-like_TNB
HypA
CvfB_2nd
DUF7130
MCM_OB
A2L_zn_ribbon
FtrD-like
S1
Zn_ribbon_ISL3
zf-FPG_IleRS
DmmA-like_C
Zn_ribbon_15
Zn_ribbon_8
OB_RRP5_4th
TerY_C
RUBY_RBDX
Zn_ribbon_NOB1
Anti-TRAP
DZR
DUF5817
Motif
Other DBs
NCBI-ProteinID:
BAN89794
UniProt:
U3TEP4
LinkDB
All DBs
Position
complement(298074..298700)
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AA seq
208 aa
AA seq
DB search
MVEKGRVMPGDVLATIEEFLPGEGVYVDGERGLIRAAAPGVAYLDMSRRVAYVKPHKKPQ
TPGLGSEVAALVTGVRGDLVVAEVYGVVRLSPKPSWLYELPSPYSAAIPISQIADEYIKN
IEDYYRVSDWILAKIVSRTPPFTLSTVEPKYGVVYAMCSRCGAVMEFQSERSMKCPRCGN
VEKRKVSIHARSRLLRIRLVRNLVVYRR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
ttggttgagaagggcagggttatgcctggcgatgtgctggcgacgatcgaggagttcctg
ccgggcgagggggtctacgtcgacggggagaggggccttataagggccgccgcccccggg
gtcgcataccttgacatgtccaggagggtggcctacgtcaaaccccataagaaaccccag
acccctggcctcggttcagaggtggcggctctggtgacgggcgtcaggggggacctggtg
gtggccgaggtctacggcgtcgtacgcctctcccccaagccctcgtggctctacgagctc
ccatccccctactcggcagccatccccatatcgcagatagcggacgagtatatcaagaat
attgaggactactaccgcgtgagcgactggatactggccaagatagtgtcgcgcacaccc
cccttcacactcagcactgttgagccgaagtacggcgtggtatacgctatgtgcagccgc
tgcggcgccgtcatggagttccagagcgaaaggagtatgaaatgccccagatgcgggaac
gtcgagaagaggaaggtttctatacacgctaggagcaggctcctgagaataaggctcgtc
agaaaccttgttgtatacaggaggtaa
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