Aeropyrum camini: ACAM_0909
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Entry
ACAM_0909 CDS
T02858
Name
(GenBank) exosome complex RNA-binding protein Rrp42
KO
K12589
exosome complex component RRP42
Organism
acj
Aeropyrum camini
Pathway
acj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACAM_0909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acj03019
]
ACAM_0909
Messenger RNA biogenesis [BR:
acj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ACAM_0909
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
ACAM_0909
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
BAN90378
UniProt:
U3TEJ0
LinkDB
All DBs
Position
complement(868029..868859)
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AA seq
276 aa
AA seq
DB search
MSITPHRLPVAPVIVREAYLSLLRKGWRLEDRDLKTPRNVKIETGIVEKAEGSALVKLGK
TQVIAGVKASVGAPFRDTPNQGVLTVHAEFVPLASPVFEPGPPDENAIELARVVDRSLRE
VGAIDLESLVIRPGEKVWVLWVDLYIIDHDGNLFDASMLATMAALMTARLPKYEESETGD
IVIKKGEKGEKVKVKTRVVTVTTAKIDRYIVVDPSLEEETVSDVRLATAIDGEGRIVGMQ
KTGMGSLTEADIETMVNYSLEASKVYFKALEEAIKP
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgagtataacgccccacaggctacccgtggccccagttatcgtgagggaggcgtacctc
tccctcctgcggaaggggtggaggcttgaggatagggatttgaagacgccgaggaacgtt
aagatagagacaggtatagtggagaaggctgaaggctccgctctggtgaagcttgggaag
acccaggtgatagctggtgttaaggctagcgtgggtgctcccttcagggatactccgaac
cagggcgttctaactgtacacgcagaattcgttcccctcgccagccctgtgttcgagcca
gggccccctgacgagaacgctatagagctggcccgtgttgtcgacaggagcctcagggag
gtcggtgcaatcgacctagagagccttgtcataagaccgggcgagaaagtctgggtccta
tgggtcgacctatacatcattgaccacgacggcaacctgttcgacgccagcatgcttgca
accatggccgcactcatgacggctaggctacccaagtatgaggagagcgagacgggagac
atagtgattaagaagggggagaagggagagaaggtaaaggttaaaaccagggtagtcact
gtcaccaccgcaaaaatagaccgctacattgtggtggacccgagcctcgaggaggagact
gtaagcgacgtgaggcttgcaaccgctatagacggggagggcaggatagttggaatgcag
aagacgggcatgggaagcctaacggaggcagacatagagactatggtgaactacagccta
gaggcctcgaaagtttactttaaagccctcgaagaggcaatcaagccctag
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