Aeropyrum camini: ACAM_1104
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Entry
ACAM_1104 CDS
T02858
Name
(GenBank) uncharacterized conserved protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
acj
Aeropyrum camini
Brite
KEGG Orthology (KO) [BR:
acj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acj03016
]
ACAM_1104
Enzymes [BR:
acj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ACAM_1104
Transfer RNA biogenesis [BR:
acj03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ACAM_1104
Prokaryotic type
tRNA splicing ligases
ACAM_1104
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF2120
Complex1_LYR
Glyco_hydro_45
Motif
Other DBs
NCBI-ProteinID:
BAN90573
UniProt:
U3TF25
LinkDB
All DBs
Position
1057487..1058932
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AA seq
481 aa
AA seq
DB search
MLPVRRIDKYVWMIPQDAKPCMRVPAIVYADDFLIEKMKQDKTLLQAANVACLQGIQKYS
IVMPDGHQGYGFPIGGVAAMDIEEENGVISPGGVGYDINCGVRVLRTNLTEEDVRPKLKE
LVDTLYYNVPSGLGSTGKVKLSIQELDKVLDTGVEWAISRGYGWAEDKEHIEERGSWSLA
DSSKVSQTAKRRGAEQLGTLGSGNHFLEVQVVERVFDERIAKAYGLFEGQVVVMIHTGSR
GLGHQVASDYLMVMERAMRKYGTIPPDRELASIPYNSPEAQNYVRAMAAAANFAWTNRQM
ITHWTRESFRKVFHQDPDKLGLEIVYDVAHNIAKIEEYDVDGKRKKLVIHRKGATRAFPP
GHPEIPRDYMDVGQPVLIPGSMGTGSYILAGVPEGVKSWYTAPHGAGRWMSRSRAKRTKT
FNQVLEELAAKGIYIRASNRATVVEEMPEAYKDVDRVAQVAHAVGIGRLVARMRPIGVTK
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctgttaggaggatagacaagtacgtgtggatgattccccaggacgccaagcct
tgtatgagggttcccgctattgtctatgccgacgactttctgatcgagaagatgaagcag
gataagacgcttctccaggcagccaacgtggcgtgccttcaaggtattcagaagtactct
atagtaatgccagacggacaccagggatacggcttcccgataggcggagtcgcagccatg
gatattgaggaggagaacggtgtcataagccctggcggcgtaggctacgatataaactgt
ggggtcagggttctaaggactaatctcacagaggaggatgttaggcctaagctgaaggag
cttgtggacacgctctactacaacgtccccagcgggctggggagcactggcaaggttaag
ctgagcatccaggagctggacaaggttctggacacgggtgtggagtgggctatatccagg
ggatacggctgggccgaggataaggagcacatagaggagaggggcagctggagcctggcg
gactcgagcaaggtcagccagacggcgaagaggaggggggccgagcagctgggcaccctc
ggcagcggcaaccacttcctcgaggtccaggttgtggagagggtcttcgacgagaggata
gccaaggcttatggcctgttcgaggggcaggttgtggttatgatacacactggcagcagg
ggtctcggccaccaggttgccagcgactatctaatggtgatggagagggcaatgaggaag
tacgggaccataccgcctgacagggagctagccagcataccatacaactcgcctgaggcc
cagaactacgttagggctatggccgcggccgcgaactttgcatggactaacaggcagatg
ataacccactggactagggagagcttcaggaaggtcttccaccaggacccggacaagctc
ggcctcgagatagtctatgacgtggctcacaacatagctaagattgaggagtacgatgta
gacgggaagagaaagaagctggtgatacacaggaaaggagccacaagagcattcccgccc
ggccacccagaaatacccagggactacatggacgtaggccagcctgtgctaatacccggc
agcatggggacaggaagctacatactagccggcgtccccgagggagtgaagagctggtac
acagccccccacggcgccgggaggtggatgagcaggtccagggctaagaggactaagacg
ttcaaccaggtcctcgaggagctggccgccaagggcatctacataagggcgagcaaccgg
gcgaccgtcgtggaggagatgccggaggcttacaaggacgtcgacagggtcgcacaggtg
gcacacgccgtcggtatagggaggctcgttgcgcgcatgaggcctattggcgtgaccaag
ggctag
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