Aeropyrum camini: ACAM_1123
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Entry
ACAM_1123 CDS
T02858
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
acj
Aeropyrum camini
Brite
KEGG Orthology (KO) [BR:
acj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acj03016
]
ACAM_1123 (ligT)
Enzymes [BR:
acj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ACAM_1123 (ligT)
Transfer RNA biogenesis [BR:
acj03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ACAM_1123 (ligT)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
BAN90592
UniProt:
U3TAN5
LinkDB
All DBs
Position
complement(1076642..1077247)
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AA seq
201 aa
AA seq
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MDPPGVYHWDTALVRVFIAVDIEDPVVVGRLARLRDSIAHTGVPMKTVEDENFHITLRFI
GEVSEPVASEIGERLASIRFGRFRIELRGLGAFPRPERPRVVWVGVSAGAEDLRRIRDEV
ERILSSMGFSPERQEFHPHVTLARIKGARNLPALVKLLREMGDVEVGSVEVSSIRLKQSI
LTRQGPIYKTLYEVKATQDQG
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
ttggaccccccgggtgtttatcactgggacacggccttggttagggtttttatcgcggta
gatatagaagacccggtggtagtaggccggctggctaggcttagggactccatagcccac
acgggcgttcctatgaagactgttgaggatgagaatttccatataacgcttaggtttata
ggagaggtaagcgagcctgtggcctcggagattggggagcgtttggcctccatcaggttc
gggaggttcaggatagagcttagggggctaggagcgttccccaggccggagaggccccgg
gtggtgtgggtgggggtgagtgctggggccgaggacctcaggaggataagggatgaggtg
gagaggatcctttcaagcatgggcttcagcccggagaggcaggagttccatccccacgtc
actctagcgaggataaagggggctaggaacctgcccgcactcgtgaagctccttagggag
atgggcgacgtggaggtgggaagcgttgaagtctcaagtataaggctgaagcagagcata
ctcacaaggcagggaccgatttacaagactctctatgaggtcaaggccacccaagaccag
ggttag
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