KEGG   Acidovorax sp. KKS102: C380_00585
Entry
C380_00585        CDS       T02290                                 
Name
(GenBank) dead/h associated domain-containing protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ack  Acidovorax sp. KKS102
Brite
KEGG Orthology (KO) [BR:ack00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ack03400]
    C380_00585
Enzymes [BR:ack01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C380_00585
    5.6.2.6  RNA 3'-5' helicase
     C380_00585
DNA repair and recombination proteins [BR:ack03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C380_00585
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AFU43845
UniProt: K0HVI4
LinkDB
Position
complement(121340..124081)
AA seq 913 aa
MSTTRRLRKALTPVAPSAAAAWMAARGWQPFGFQHDVWRAMGEGRSGLLHATTGAGKTYA
VWLGALQHLAQADAAPAPEGAPKAPKAPNARTALRTRRAAAPPLTVLWITPMRALAADSL
RALQAPLPDLAPTWTSGLRTGDTASGERAAQDRRLPTLLVTTPESVSLLLARADARERLA
SVRLVVVDEWHELVGNKRGVQVQLALARLSGWNPALQVWGMSATLGNLEEALHTLLPQPV
PNAPSASQPPPAVLVQGRIDKRLEVQVMLPARADRFAWAGHMGLSLLPQVVQSIEAAAST
LVFTNTRSQAERWYQALLEARPDWAGTLALHHGSLGHEVRDWVEQGLKAGQLKAVVCTSS
LDLGVDFLPVEQVLQIGSAKGVARLVQRAGRSGHAPGRSSSITLVPTHSLELVEAAAARH
ALAQGRIEDRHTPRAPLDVLVQHLVTVALGGGFVPDALLAEVRRAPAYAALADNDWQWAL
QFVRQGGASLATYPDFHRVVPDDEGVWRVPDARLARRHRSNIGTIVSDAAMQVQFVSGGR
LGSVEESFIARLRKGDVFMFAGRLLELVRTQQMTAYVRIAPKGSAALPRWSGGRMPLSNT
LADAMLEQLAQAERGEFSTPEMRCAQPLLELQQAWSALPTPGRLVAETLHTREGWHLYLY
PLAGRLVHLGLAGLLGWRASQQVPNTFSIAVNDYGLELLSAKPVDWATLLPRLIGEGTRT
TIGRGLEDEVLASLNATEMARRRFREIARIAGLIFQSHPGEQRSSRQLQASSSLYYDVFA
QYDPGNLLLAQARAELLTNELDMDRLAHTLRGMQALTLSIHALERPTPFALPLMVERFRE
RLSTETLADRLARMVQALEQAADVTTGTHLAQHAVQPTDMVWDLPESSGPRTPRARQAAA
GDAPRRARGRHGF
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgagcaccacccgccgcctgcgcaaggccctgaccccggtggcaccgagtgccgcagcc
gcctggatggcggcgcggggctggcaaccctttggcttccagcacgacgtgtggcgcgcg
atgggcgagggccgctcgggcctgctgcatgccactacaggggctggcaagacctatgcg
gtatggctgggcgcgctgcagcacttggcacaggcggatgctgcacctgcgcccgaagga
gcccccaaagcccccaaagcacccaacgcccgcaccgccctgcgcacgcgccgcgctgcg
gcaccgcccctcaccgtgctgtggatcacgcccatgcgcgcactcgctgccgattcgctg
cgcgccctgcaggcaccgttgcccgacctggcccccacctggaccagcggcctgcgaacc
ggagacaccgccagcggcgagcgcgccgcgcaagatcgccgcctgcccacgttgctggtg
accacgcccgaaagcgtctcgctgctgctggcccgcgccgatgcgcgtgagcgcctggcc
agcgtgcgcttggtggtggtggatgagtggcacgagttggtgggcaacaaacgcggcgtg
caggtgcagctggcgctggcgcgcctgtcgggctggaacccggcgctgcaggtgtggggc
atgtcggccacgctgggcaacctggaggaggccctgcacaccttgctgccgcagcccgtg
cccaacgctccgagcgcatcgcaaccaccgcccgccgtgctggtgcagggccgcatcgac
aagcggctggaggtgcaggtgatgctgcccgcgcgggccgatcgctttgcgtgggcgggc
cacatggggctgagcctgctgccgcaggtggtgcaatcgatcgaagcggccgcgtccacg
ttggtattcaccaacacccggtcgcaagccgagcgctggtaccaggcgctgctggaggcg
cgacccgactgggcgggcacccttgcgctacaccacgggtcgctggggcatgaggtgcgc
gactgggtggagcaaggcctgaaggccgggcagctcaaggccgtggtgtgcacatcgagc
ctggacctgggcgtggactttttgccggtggagcaggtgctgcagatcggttcggccaag
ggcgtggcgcggctggtgcagcgtgcgggccgctcgggccatgcgccggggcgcagctcc
agcatcacgctggtgcccacgcacagcctggagctggtggaggccgccgccgcgcgccac
gcgctggcgcagggccgcatcgaagaccggcacacgccgcgtgcgccgctggatgtgctg
gtgcagcacctggtcaccgtggcgctgggcggcggctttgtgcccgatgcgctgttggcc
gaggtgcgccgcgcacccgcctacgctgcgttggccgacaacgactggcagtgggcgctg
cagttcgtgcgccagggcggcgcatcgctggccacctatccggactttcaccgcgtggta
ccggacgacgagggtgtgtggcgcgtgcccgatgcgcgcctggcgcgccgccaccgcagc
aacatcggcaccatcgtgagcgacgccgccatgcaggtgcagtttgtgagcggcgggcgc
ctgggctcggtggaagagagcttcatcgcgcggctgcgcaagggcgatgtgttcatgttt
gcaggccggctgctggagctggtgcgcacccagcagatgacggcctatgtgcgcatcgcc
cccaagggcagcgccgccctgccgcgctggagcggcgggcgcatgccgctgtcgaacacg
ctggccgatgcgatgctcgagcagctggcgcaggccgagcgcggcgagttctccacgccc
gagatgcgctgcgcccagccgctgctggagctgcagcaggcctggtcggccctgcccaca
cccggccgcctggtagccgagacgctacacacccgcgaggggtggcacctgtacctgtac
ccgctggcgggccgcttggtgcacctgggcctggccgggctgctgggctggcgcgcgtcg
cagcaggtgcccaacaccttctccatcgcggtcaacgactacggactggagctgctgtcg
gccaagcccgtggactgggccacgctgctgccgcgcctgattggcgagggcacacgcacc
accatcggtcgcgggctcgaagacgaagtgctggccagcctgaacgccaccgagatggcg
cgcaggcgctttcgcgagatcgcgcgcattgccgggctcatctttcaaagccacccgggc
gagcagcgcagcagccgccagctgcaggcctcgtcctcgctgtactacgacgtgtttgcg
cagtacgacccgggcaacctgctgctggcccaggcccgtgccgagctgctgacgaacgag
ctggacatggaccgcctggcgcacacactgcgcggcatgcaggcactgaccctgtccatc
cacgcgctggaacgccccaccccattcgccctgccgctgatggtggagcgctttcgcgag
cgcctgagcaccgagaccctggccgaccggctggcgcgcatggtgcaggcgctggagcag
gcggccgacgtcaccaccggcacccaccttgcgcagcacgcagtgcagcccacggacatg
gtgtgggacctgcccgaaagctctgggccccgcacaccacgcgcgcgccaggctgcggct
ggggacgccccccgccgcgcccgcggacgccacggattctga

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