Acidovorax sp. KKS102: C380_06880
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Entry
C380_06880 CDS
T02290
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ack
Acidovorax sp. KKS102
Pathway
ack03030
DNA replication
ack03410
Base excision repair
ack03420
Nucleotide excision repair
ack03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ack00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C380_06880
03410 Base excision repair
C380_06880
03420 Nucleotide excision repair
C380_06880
03440 Homologous recombination
C380_06880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ack03032
]
C380_06880
03400 DNA repair and recombination proteins [BR:
ack03400
]
C380_06880
Enzymes [BR:
ack01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C380_06880
DNA replication proteins [BR:
ack03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C380_06880
DNA repair and recombination proteins [BR:
ack03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C380_06880
NER (nucleotide excision repair)
GGR (global genome repair) factors
C380_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
SSO1393-like_WHD
Motif
Other DBs
NCBI-ProteinID:
AFU45086
UniProt:
K0I7Z9
LinkDB
All DBs
Position
1498915..1501713
Genome browser
AA seq
932 aa
AA seq
DB search
MSNKKTLVLVDGSSYLYRAFHAMPDLRAVPGDPTSPATGAIRGMINMMQALRKEVVADYA
VCVFDASGPTFRDALYTEYKATRSPMPDDLRSQIEPIHEVVDLLGWKVVAVPGVEADDVI
ATMAHMAAAQGIEVIVSSGDKDLSQLVNEHITIIDTMSGKRRDVAGVTAEFGVPPALMVD
YQALVGDTVDNVPGVTKVGPKTAAKWLEEYGSLDNLIANADAIKGVAGNNLREAIASGQL
ALSRQLVTMKTDCALADYIPGLPAFDDITLDAPDNEGLLPFYEKYGFKGLAAAIKGAAAP
ATAAPTVAMPGQSGDLFADHSASTVAEEAQHRTVVYDTILNWADFDQWLERLHKAPLTAI
DTETDSLDEMRAQIVGISFSVQPGEAAYIPLRHEGPDAPAQLPLDEVLARLKPWLEDPKH
HKLGQHIKYDRHVFANHGIEVQGYAHDTMLQSYVLEVHKPHNLTSLAERHTGRKGITYED
LCGKGAHQIPFAQVPVDKAAAYSCEDSDQTLDVHNALWPLLQADDKLRFIYELEIASSEA
LYRIERNGVLIDAPTLAAQSHELGQRILQLETEAYEIAGQPFNLSSPKQLGEIFFDKLGM
PVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLVKLKGTYTDKLAQLALPRTGRVH
THYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPAGRVIASADYSQIELRIMAH
LSGDHSLLHAFHAGLDVHRATAAEVFGVEVDQVTSEQRRYAKVINFGLIYGMSSFGLAKN
LGIETKAAAAYIDKYFQRYPGVKQYMDDTKAAAKSMGYVETVFGRRLYLPEINSPNGPRR
AGAERAAINAPMQGTAADLIKLAMVAVQKELDAHKTDIKMIMQVHDELVFELPESEVDWL
KTHIPRLMAEVAALKVPLLAEVGVGANWDKAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaaaagaccctggtgctggtggacggctccagctacctctaccgcgccttc
cacgccatgcccgacctgcgggccgtgccgggcgaccctaccagccctgccaccggtgcc
attcgcggcatgatcaacatgatgcaggccctgcgcaaagaggtggtggccgactacgcc
gtgtgcgtgttcgacgcctcgggccccaccttccgcgatgccctgtacaccgaatacaag
gccacgcgctctcccatgcccgacgatctgcgcagccagatcgagcccatccacgaagtg
gtggacctgctgggctggaaggtggtggccgtgcccggcgtggaggccgacgacgtcatc
gccaccatggcccacatggccgcagcgcagggcattgaggttatcgtgtccagcggcgac
aaggatttgagccagctggtcaacgagcacatcaccatcatcgacaccatgagcggcaag
cgccgcgacgtggcgggcgtgacggccgagtttggcgtgccccccgcgctgatggtggac
tatcaggccctggtgggcgacaccgtggacaacgtgcccggcgtgaccaaggtcggcccc
aagaccgccgccaagtggctggaagaatatggctcgctcgacaacctgattgccaacgcc
gatgccatcaagggcgtggcgggcaacaacctgcgcgaggccattgcaagcggccaactg
gccttgagccgccagctcgtcaccatgaagacagactgcgcgctggccgactacattccc
ggcctgcccgcgtttgacgacatcacactggatgcgcccgacaacgagggcctgctgccg
ttttacgaaaagtacggcttcaagggcctggccgccgccatcaagggcgctgcagccccg
gccacagcagcccccaccgtcgccatgcccggccaaagcggcgacctgttcgcggaccac
tccgccagcaccgtggccgaagaagcccagcaccgcacggtggtgtacgacaccatcctc
aactgggccgactttgaccagtggctagagcgcctgcacaaagccccgctcacggccatc
gacaccgagaccgattcgctggacgagatgcgcgcgcaaatcgtcggcatcagcttcagc
gtgcagcccggcgaagccgcctacatccccctgcgccacgaaggccccgatgcgcccgcg
cagttgccgctggatgaagtgctcgcccgcctcaaaccctggctggaggaccccaagcac
cacaagctgggccagcacatcaaatacgaccgccatgtgttcgccaaccacggcatcgaa
gtgcagggctacgcgcacgacaccatgctgcaaagctatgtgctcgaagtgcacaagccc
cacaacctgaccagcctggccgagcgccacacgggccgcaaaggcatcacctacgaagac
ctgtgcggcaaaggcgcgcaccagattccgtttgcgcaagtgccggtagacaaagccgcc
gcctactcgtgcgaagactccgaccagaccctggacgtgcacaacgccctgtggccgctg
ctgcaggccgatgacaaactgcgctttatctacgagctggagatcgccagcagtgaggcc
ctgtaccgcatcgaacgcaacggcgtgctgattgacgcgcccacgctggccgcccaaagc
cacgaactgggccagcgcatcttgcagctcgaaaccgaggcgtatgaaattgcgggccag
cccttcaacctgagcagccccaagcagctcggcgaaatcttctttgacaagctgggcatg
cccgtggtgaagaagaccgccaccggtgcccgcagcaccgacgaggaagtgctggaaaaa
ctggccgaggactaccccctgcccgccaaactgctggagcaccgcagcctcgtcaagctc
aagggcacctacaccgacaagctggcccagctggccctgccacgcaccggccgcgtgcac
acgcactacgcgcaggccgtggccgtcacaggccgcttgtccagcaacgaccccaacctg
cagaacatccccatccgcacgcccgaaggccgccgcgtgcgcgaggcctttgtggcccct
gcgggccgcgtgattgcgagtgccgactactcgcaaatcgaactgcgcatcatggcccac
ctgagcggcgaccactcgctgctgcacgccttccacgccgggctggatgtgcaccgcgcc
actgctgccgaagtgtttggtgtggaagtggaccaggtcaccagcgagcagcgccgctac
gccaaggtcatcaactttggcctcatctacggcatgagcagctttggcctggccaagaac
ttaggcatcgaaaccaaggccgcagccgcctacatcgacaaatacttccagcgctacccc
ggcgtgaagcagtacatggacgacaccaaggccgccgccaaatccatgggctatgtcgaa
accgtgtttggccgccgcctgtacctgcccgaaatcaactcccccaacggcccccgccgc
gccggggccgaacgcgccgccatcaacgcgcccatgcagggcacggcggccgacctcatc
aagctggccatggtggcggtgcagaaggagctggacgcccacaagacagatatcaagatg
atcatgcaggtgcacgacgaactggtgttcgaactgcccgagagcgaagtggactggctc
aagacccacatcccgcgcctgatggcggaagtggcggcgctgaaggtgccgttattggcg
gaagtgggggtgggggctaattgggataaggcgcattga
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