Acidovorax sp. KKS102: C380_07255
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Entry
C380_07255 CDS
T02290
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ack
Acidovorax sp. KKS102
Pathway
ack03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ack00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C380_07255 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ack03019
]
C380_07255 (rnc)
03009 Ribosome biogenesis [BR:
ack03009
]
C380_07255 (rnc)
03036 Chromosome and associated proteins [BR:
ack03036
]
C380_07255 (rnc)
Enzymes [BR:
ack01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
C380_07255 (rnc)
Messenger RNA biogenesis [BR:
ack03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C380_07255 (rnc)
Ribosome biogenesis [BR:
ack03009
]
Eukaryotic type
90S particles
RNase
C380_07255 (rnc)
Prokaryotic type
rRNA processing factors
C380_07255 (rnc)
Chromosome and associated proteins [BR:
ack03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
C380_07255 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Pyruv_OxRed_insertion
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AFU45160
LinkDB
All DBs
Position
1587036..1587719
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AA seq
227 aa
AA seq
DB search
MQAGLLALQGRLQHVFSDPSLLQRATTHRSFSADHNERLEFLGDSVLNLAVASLLYQRLS
ALPEGDLSRVRANLVKQDTLHQLAVRLKVSEVLRLGEGEAKSGGQQRPSILADALEALIG
AVYLDAGYASAEALVHRLFQGVEINPQMQAASKDAKTALQEWLQGRKMKLPQYKVVATVG
AAHRQTFDVECDIPELGLTERGIGGSRRAGEQAAAAAMLATLKAKNL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggccggtctcttagcgctgcagggtcgcctgcagcatgtattttctgatccctcg
ctgctccagcgtgcaactacgcaccgcagtttctcggccgaccacaacgagcggcttgaa
ttcctgggcgattccgtcttgaacctggcggtggccagtttgttgtaccagcggctgtcg
gccttgccggagggtgatctttcgcgcgtccgggcaaatctggtcaagcaagacacgctg
caccagttggctgtgcggctcaaagtgtccgaggtgttgcgtctgggggagggcgaggcc
aagtcgggcgggcagcagcggccctccatcctggccgatgcactggaagccctgatcggt
gcggtgtatctggatgctggctatgccagcgcagaagccctggtgcaccgtcttttccag
ggcgtggagatcaatccgcagatgcaagcagcgtccaaggacgcgaaaaccgcgttgcag
gagtggctccagggccgcaaaatgaagctgccgcagtacaaggtggtggcgacggtgggg
gcagctcaccgccagaccttcgacgtcgagtgcgatattcccgaactgggcctgaccgag
cgtggcatcggcggctcgcgcagggcgggcgaacaagccgctgctgcggccatgctggcc
acattgaaagcaaagaatttatga
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