Acidovorax sp. KKS102: C380_10950
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Entry
C380_10950 CDS
T02290
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ack
Acidovorax sp. KKS102
Pathway
ack03030
DNA replication
ack03430
Mismatch repair
ack03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ack00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C380_10950
03430 Mismatch repair
C380_10950
03440 Homologous recombination
C380_10950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ack03032
]
C380_10950
03400 DNA repair and recombination proteins [BR:
ack03400
]
C380_10950
Enzymes [BR:
ack01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C380_10950
DNA replication proteins [BR:
ack03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C380_10950
DNA repair and recombination proteins [BR:
ack03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C380_10950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AFU45891
UniProt:
K0I9V5
LinkDB
All DBs
Position
2377101..2380634
Genome browser
AA seq
1177 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTNRIDEVAKAAAKDGQPALAITDLNNLFGAIKFYKEARGKGVKP
ILGAEIFLEGEAGAPPSRLIVLVQSRQGYLNLSELLARAWTRNVVKNLALSTWAWLEELS
EGLIALSGAQAGPVGQALMKGDESGAADIALRLAGIFPHRFYVELQRAGRTDDEAHVVAA
AQLAARLSLPVVATHPIQFAGPDDYEAHEARICIAEGEILANPRRVRKFTRDQYFKTSAE
MEALFADLPSAIANTVEIAQRCNLTLVLGKPQLPDFPTPNGMPIDEYFRYASFEGLEERL
KHLFPDEAERDKQRPRYVERLEFELGTILKMGFPGYFLIVGDFIQWAKNNGCPVGPGRGS
GAGSLVAYALKITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQSNRDRVIDYVKDKYGK
NAVSQIATFGTMAAKAAIRDVGRVMDMSYTFCDGISKLVPGKPGMSYTLAYPPEVKKEGD
KNNYALELEPMLYERVRKEEDVKTVIEMAQKLEGMTRNIGMHAGGVLIAPGKLTDFCPLY
QQPGSESAVSQYDKDDVEAIGLVKFDFLGLATLTILEIAREFIIKRHKGQENFAFENIPL
DDGPTYRLFSEGKTEAVFQFESRGMQGMLKEARPSRLEDLIALNALYRPGPMDLIPSFVN
RKHGKEEVIYPHPLVEPVLAETYGIMVYQEQVMQTAQVLGGYSLGGADMLRRAMGKKKAE
EMAEHRAIFRKGAAEKGISQEKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHY
TAEFFCANMTVEMDDTDKLKVLFEDAQKMGLSFEPPDVNRGFYRFEPVTDKIIRYGLGAV
KGTGQQAIEAIVAAREGRGEGPQGSTKGPFKSLFDFCVRVDKARMNKRTVEALIKAGAFD
TIHLNRAALVASIDRAFDFAAAMLANVNQGGLFDMMGDDAHGSSTQEPDLVDATPWGIKE
RLTLEKTAVGFYLSGHLFDEVATEVRRFVRTQIDELLDSREPQVLAGIISDFRVINGQRG
KLGLFKLDDKSAVIEASADEALLNTYRNQLKEDEFVVMMGRLQLDHFSGGLRVKVQQVWD
LAGARCRFGKYLHVTVGDKAPDVPRLVREFPPVREEVAEGELVHGLRVRMGVRCQSDDAA
AVAELQLGENARFYPSDAALAAWTAQVGAGAANVVYE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcatttgcgcctgcacaccgagttctccgtcgttgacggtaccaatcgcatc
gacgaggtggccaaagccgctgccaaagacggccagcccgctctggctatcaccgatctc
aacaatctttttggcgcgatcaagttctacaaggaagcgcggggcaagggtgtcaagccc
atcctgggggcggagatctttctcgaaggcgaggcgggtgcacccccgtcgcgtctcatc
gttctggttcagagtcggcaggggtatctgaacctttcggagctgttggcccgcgcctgg
acgcgcaacgttgtgaaaaacctggcgttgagcacctgggcatggctggaggagttatcc
gagggattgatcgctttatctggcgctcaggccggtccggttgggcaggcgcttatgaag
ggggatgagtcgggcgctgcggacattgcgttgcgtctggcgggcattttcccgcaccgg
ttttatgtggaacttcaacgcgctggccgcactgacgatgaagcccatgtggttgctgca
gcccagctcgctgcacgactgagtctgcctgtcgtggcaacccacccgattcagtttgct
ggtcctgacgattacgaggcgcacgaggcccgcatctgcatcgctgaaggggaaatcctg
gccaacccccgccgggtgcgcaagttcacccgcgaccagtatttcaagacctctgcggag
atggaggccttgtttgccgacctgccatcggccattgccaatacggtcgagattgcgcaa
cgctgcaatctgaccctggtgttgggcaaaccgcagttaccggactttccgacgcccaat
ggcatgcccatcgatgagtattttcgctacgcgtcgttcgaagggttggaggagcgcctg
aagcatctcttccctgacgaggccgaaagagacaagcagcgaccacgctacgtggagcga
ctggagttcgagctgggcaccattctcaagatggggtttcccggttacttcctgatcgtg
ggtgacttcattcagtgggcgaagaacaatggctgcccggtggggccgggccgtggttcg
ggtgccggttcgctggtcgcctatgcgctgaagatcaccgacctggacccgctgcaatac
aacctgctgttcgagcgctttctgaacccagagcgcgtgtcgatgcctgacttcgacatc
gatttctgccagtccaaccgcgatcgggtgattgactatgtcaaggacaaatacggcaag
aacgctgtgagccagatcgccaccttcggcacgatggcggccaaggctgcgatccgcgac
gtgggccgggtcatggacatgagctacacattctgtgatggcatctccaagctggtgccc
ggcaagcccggcatgtcctacaccctggcctatccgcctgaggtgaaaaaggaaggcgac
aagaacaactacgcgctggagctggagcccatgctttacgagcgcgtgcgcaaggaagaa
gacgtcaagaccgtcatcgagatggcgcaaaagctcgagggcatgacgcgcaacatcggc
atgcatgccggcggcgtgttgatcgcgcctggcaaactcaccgatttctgcccgctgtac
cagcagccgggcagcgagtcggccgtgagccagtacgacaaggacgacgtggaagccatc
ggactggtcaagttcgactttctggggttggcaacgctcaccattctggagattgcgcgc
gagttcatcatcaaacgccacaagggccaggagaactttgcgttcgagaacattccgctc
gacgacgggccgacgtaccggctgttctccgagggcaagaccgaagcggtgttccagttt
gaaagccgcggcatgcagggcatgttgaaagaggcgcgccccagccggctggaagacctg
atcgccctgaacgcgttgtaccggccagggcccatggacctgattcccagcttcgtgaat
cggaaacatggcaaggaagaggtcatctacccccacccgctggtggagcccgtgctggcc
gagacttacgggatcatggtgtaccaggagcaggtgatgcaaaccgctcaggtcctgggc
ggatacagcctgggcggcgccgacatgctgcgccgggccatgggcaagaagaaggccgag
gaaatggccgagcaccgcgccattttccgcaagggagctgccgagaagggcattagccag
gagaaggctgacgaggtgttcgacttgatggagaagtttgcgggctacggcttcaacaag
tcgcacgcagctgcttattccctgctggcgtatcacaccggctggctcaaggtgcactac
accgccgagttcttctgcgccaacatgacggtggaaatggatgacaccgacaagctcaag
gtgttgtttgaagacgcgcaaaagatggggctgtcgtttgagccgccggatgtgaatcgg
ggcttttaccggttcgaacccgtcaccgacaagatcatccgttatggcctgggggccgtg
aaaggcacgggtcaacaggcgattgaagccatcgtcgccgcccgcgaagggcgtggagag
gggccacagggctcgacgaaggggcctttcaagagtttgtttgatttctgtgtgcgggtg
gacaaggcccgcatgaacaagcgcacggtggaagcactgatcaaggctggcgcctttgac
accatccatctcaaccgggcagccctggtcgcttcgattgaccgtgcgtttgacttcgcc
gccgcaatgcttgccaacgtgaaccagggggggttgttcgacatgatgggcgacgacgcc
catggctccagcacgcaggaaccagacctggtggatgcaacgccctggggcatcaaggag
cggctcacgctggaaaaaactgccgttgggttctatctgtctggccacctatttgatgaa
gtggcgacggaggtgcgccgttttgtgcgcacacagatcgacgagctgctggatagccgt
gagccccaggtcctggccggcatcatcagcgacttccgggtcatcaacgggcaacgtggc
aagctggggctcttcaaactggacgacaagtctgcagtgatcgaagcgtctgcggatgaa
gcgctgctcaatacctaccgcaaccagctcaaggaggacgagtttgtggtgatgatggga
aggttgcagctggaccacttcagcggcggcctgcgcgtcaaggtgcagcaggtgtgggat
ttggcgggcgcgcgttgccggtttggcaaatatctgcatgtgaccgtgggtgacaaggcg
ccagatgtgccacgcctggtgcgcgagtttccaccggtgcgtgaagaggtcgccgagggg
gaactggtgcacgggctgcgcgtgcgcatgggtgtgcgctgccagtcggacgacgcggcc
gcagtggcggagttgcaactgggcgaaaacgcgcgtttttaccccagcgatgcggccctt
gcagcgtggacggcccaagtaggcgctggtgcagccaatgtagtctatgagtga
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