Acidovorax sp. KKS102: C380_12820
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Entry
C380_12820 CDS
T02290
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ack
Acidovorax sp. KKS102
Brite
KEGG Orthology (KO) [BR:
ack00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ack03400
]
C380_12820
DNA repair and recombination proteins [BR:
ack03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
C380_12820
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
AAA_10
FtsK_SpoIIIE
TrwB_AAD_bind
ResIII
AAA_16
T2SSE
SLFN-g3_helicase
AAA
AAA_7
AAA_30
AAA_19
AAA_28
CbiA
nSTAND3
nSTAND_NTPase5
IstB_IS21
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AFU46265
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Position
2790307..2791845
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AA seq
512 aa
AA seq
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MADPLLIAKHDTIECHLLPGLANRHGLITGATGTGKTVTLQTLAENFSRIGVPVFMADVK
GDLTGASQPGKIGDKLAAVLKERGLDLPEPSACPTTLWDVFGEQGHPVRATVSDMGPLLL
GRMLNLNETQLGVLNLVFKIADDNGLLLLDLKDLRAMLQYVGDNSKEFTTEYGNVSAASV
GAIQRGLLQIEQQGGDKFFGEPMLNIQDFMQTVDGHGVVNILAADKLMNSPRLYATFLLW
MLSELFEQLPEIGDPEQPKLVFFFDEAHLLFNEAPKVLIERIELVVRLVRSKGVGVYFVT
QNPLDIPDSVLAQLGNRVQHALRAFTPRDQKAVKATATTMRQKPGLDIETAITELAVGEA
LVSFLDAKGRPSVTERVFVLPPGSQLGPITPQQRQALMASSLVAGVYEKMVDRESAYEKL
KGRAAEAGTQAGNAAGGGNGKVTAGTPAEEGGGLLGGLNDVLFGSTGPRGGKRDGLAQTM
AKSAVRTMGTTIGKEILRGVLGGIFGGGSKRR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccctcctgattgccaagcacgacaccatcgaatgccacctgttgcccggc
ctggccaaccggcacgggcttatcaccggcgccaccggcaccggcaagaccgtgaccctg
caaaccctggccgaaaacttctcgcgcattggcgtgccggtgttcatggccgacgtgaag
ggcgacctcacgggcgctagccagcccggcaagattggcgacaagctggccgccgtgctc
aaggagcgcggcctggatctgccagaaccctcggcctgccccaccacactgtgggacgtg
ttcggcgagcagggccacccggtgcgcgccacggtgtccgacatgggcccgctgctgctg
ggccgcatgctcaacctgaacgagacgcagctgggcgtgctcaatctggtgttcaagata
gccgacgacaacggcctgctgctgctggacctgaaagacctgcgcgccatgctgcagtac
gtgggtgacaacagcaaggagttcaccaccgagtacggcaacgtcagcgccgccagcgtg
ggcgccatccagcgcggcctgctgcagatcgagcagcaaggcggcgacaagttctttggc
gagcccatgctcaacatccaggacttcatgcagaccgtggacggccacggcgtggtcaac
atcctggcggcggacaagctcatgaactcaccgcgcctgtacgccacattcctcttgtgg
atgctgtccgagctgttcgagcaactgcccgaaatcggcgaccccgagcagcccaagctg
gtgttcttcttcgacgaggcccacctgctgttcaacgaagcgcccaaggtgctcatcgag
cgcattgagttggtggtgcgcctggtgcgttccaagggcgtgggcgtgtacttcgtcacc
cagaacccgctcgacatccccgacagcgtgctggcccaactgggcaaccgcgtgcagcac
gcgctgcgcgccttcaccccgcgcgaccagaaggccgtgaaggcgacggccaccaccatg
cggcaaaagccggggctggacatcgagactgccatcaccgagctggccgtgggcgaggcg
ctggtgagctttctggacgccaagggccgccccagcgtgaccgagcgtgtgtttgtgctg
ccacccggcagccagctgggccccatcaccccgcagcagcgtcaggcgctgatggccagc
tcgctggtggcgggtgtatacgaaaaaatggtagaccgcgagtccgcctacgaaaaactc
aagggccgcgcagctgaagccggcacgcaggcaggcaatgcagcgggcggtggcaacggc
aaggtgaccgccggcacgcccgctgaagaaggcggcggcctgctgggcgggctgaacgat
gtgctgtttggtagcaccggcccacgcggcggcaaacgcgatggcttggcgcagaccatg
gccaagtccgccgtgcgcaccatgggcaccacgattggcaaggagattttgcggggtgtg
ctgggcggcatctttggcgggggcagcaagcgccgttga
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