Acidovorax sp. KKS102: C380_13160
Help
Entry
C380_13160 CDS
T02290
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
ack
Acidovorax sp. KKS102
Brite
KEGG Orthology (KO) [BR:
ack00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ack03019
]
C380_13160
Enzymes [BR:
ack01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C380_13160
Messenger RNA biogenesis [BR:
ack03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C380_13160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
Helicase_C
OB_NTP_bind
DEAD
HA2_C
AAA_22
NACHT
AAA_19
HA2_N
nSTAND3
T2SSE
AAA_23
SRP54
AAA_30
PhoH
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AFU46333
UniProt:
K0HTM0
LinkDB
All DBs
Position
complement(2870207..2873254)
Genome browser
AA seq
1015 aa
AA seq
DB search
MTESAPLPPTPPASRAAPAASATTPLRITFPDSLPVSGKRDEIMEAITKHQVIIVCGETG
SGKTTQLPKIALALGRGKCNANPGQKGQLIGHTQPRRIAASSVAKRIAEELNTPLGDVVG
FKVRFQDRLSRDASVKLMTDGILLAETQTDPLLKAYDTIIIDEAHERSLNIDFLLGYIRQ
ILPRRPDLKVIVTSATIDADRFAKHFESAKGPAPVIMVSGRTFPVEQRYRPFEESRDYGL
NEAIADGVDELWQGNAAGDILVFLPGEREIREAADHLRKHLSHQPVMRNAEVLPLFARLS
QAEQDRIFDGHTGRRIVLATNVAETSLTVPGIRYVIDAGTARVKRYSFRSKVEQLLVEPI
SQAAANQRAGRCGRVANGICIRLYDEADFNSRPRFTDPEILRSSLAGVILRMKSLHLGDV
TQFPFIEAPSGRAIADGYQLLAELGAVDDANELTSVGVELSRLPLDPRVGRMIIEARDRK
ALDEVLIIASALSVQDVRDRPMEAQQQADQAHAKFDDDKSEFSGYLKLWKWINEARGGAP
SLPSARAQKAMAAQKAPSQAYLPVERRGGAPAAAAAAAIPAAPAATHKLSNRQYEQLLRQ
NFISIRRLREWRDIHTQLLTVVTEHKWQINTQPASYEQLHLSMLAGLLGNVGCKSDEEDW
YLGARGIKFYKHPGAHLNKKPGRWIIASELVETTRLFGRGIAAIEPQWLEQIGGHLLKKQ
LLDPHWEKKSAEVVALERATLYGIVVYNNRRVNFGKVDPHAAREVFIREALVGGNWETRL
PFLAANQKMIAKVEELEHKSRRQDVLVDDELIYAFYDQQLPPEVCSGHSFEAWYRDESKK
QPDLLKLTREELMRHEAAGITTNAFPKTVRLGGVDCAASYLHEPGDARDGITVTIPLFVL
NQVSEERCEWLVPGMLKDKIQALLKSLPQRPRSRFVPLPESATRLAELLGAPERFGTGSL
TDVLLKQVRDETSLDVKRADFKLDMLSPHLYQRAGAVRVHRLLCRAFGVDLLHHP
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatccgcgcctctcccccccacgccacccgcctcccgcgccgcccctgccgcc
tctgccaccacgccgctgcgcatcacttttcctgattccctgcccgtttcgggcaagcgc
gacgagatcatggaggccatcaccaagcaccaggtcatcatcgtgtgtggtgagacgggg
tcgggcaagaccacgcagctgcccaagatcgcgctggcgttgggacgtggcaagtgcaat
gccaaccccggacagaaagggcagctgattggccacacccagccgcgccgcattgccgcc
agcagcgtggccaagcgcattgccgaagagctgaacacgccgctgggcgacgtggtgggc
ttcaaggtgcggtttcaggaccgcttgagccgcgatgcgtccgtcaagctgatgaccgac
ggcatcctgctggccgagacgcagaccgacccgctgctcaaggcctacgacaccatcatc
atcgacgaggcgcacgaacgcagcctcaacatcgacttcttgctgggctacatccgccag
attctgccccgcaggccggatctgaaggtcatcgtcacctcggccaccattgatgccgac
cggtttgccaagcacttcgaatccgctaaaggtccagcgccggtcatcatggtgtcgggc
cgcaccttcccggtcgagcaacgctaccgcccgtttgaagaaagccgcgactacggtctg
aacgaggccattgccgatggcgtggatgagctgtggcagggcaacgcggcgggcgacatc
ctggtctttttgcccggcgagcgcgagatccgcgaggcggcagaccatttgcgcaagcac
ctgtcgcaccagccagtgatgcgcaatgccgaggtgttgccgctgttcgcgcgcctgtcg
caagccgagcaggatcgcatctttgacggccacacgggccgccgcatcgtgctggcgacc
aacgtggccgagacctcgctcacggtgccgggcatccgatacgtcattgacgcaggcaca
gcgcgcgtcaagcgctactctttccgtagcaaggtggagcagctgctggtcgagcccatc
agccaggccgccgccaaccagcgcgcgggccggtgcggccgggtggccaacggcatctgc
atccgcctgtatgacgaggcagacttcaacagccgcccgcgctttaccgaccccgaaatt
ttgcgtagctcgctggccggcgtcatcctgcgcatgaagtcgctgcacctgggcgacgtc
actcagtttccgttcatcgaggcgccctcgggccgcgcgattgccgacggctaccagctg
ctggccgagctgggcgcggtggacgacgccaacgaactcacgtccgtgggcgtggagctg
tcgcgcttgccgctggacccgcgcgtgggccgcatgatcatcgaggcgcgcgaccgcaag
gcgctggacgaggtgctcatcattgccagcgccctgagcgtgcaggacgtgcgcgaccgt
cctatggaagcgcagcagcaggccgaccaggcgcacgccaagttcgacgacgacaagagc
gagttcagcgggtatctgaagctgtggaagtggatcaacgaggcccggggcggggcgccc
agcttgccgtcggcccgtgcccaaaaagccatggccgcgcagaaggcgccgtcgcaggcg
tacctgcccgtggagcggcgcggcggcgcgcctgcagcggctgctgcagcagcaataccc
gccgccccagccgccacccacaaactcagcaaccgccagtacgagcagttgctgcgccag
aacttcatcagcatccgccgcctgcgcgagtggcgcgacatccacacccagctgctcaca
gtggtgaccgagcacaagtggcagatcaacacccagcccgccagctacgagcaactgcac
ctgtccatgctggccgggctgctgggtaacgtcggctgcaaaagcgacgaggaggactgg
tacctgggcgcgcgtggcatcaagttctacaagcacccgggcgcgcacctcaacaagaag
cccggccgctggatcatcgcgtcggaactggtcgagaccacgcgcctgttcggccggggc
atcgctgcgattgagccgcagtggctggagcagatcggcggccacttgctgaagaagcaa
ctgctggacccgcactgggagaagaagtctgccgaggtcgtcgcgctggagcgcgccacg
ctctacggcatcgtggtctacaacaaccgccgcgtgaacttcggcaaggtagacccgcac
gccgcgcgcgaggtgttcatccgcgaagccctggtgggcggtaactgggagacgcgcctg
ccgtttttggccgccaaccagaagatgatcgccaaggtcgaagagctggagcacaagtcc
cgccgccaggatgtgctggtggacgacgaactcatctacgccttctacgaccagcaactg
ccgcccgaagtgtgcagcggccatagctttgaggcctggtaccgcgacgaaagcaaaaag
caacccgacctgctcaagctcacccgcgaagagctgatgcgccacgaggctgcaggcatc
accaccaacgcctttcccaagacggtgcgcctgggcggcgtggactgcgctgcgagctac
ctacacgagcccggcgatgcgcgtgacggcatcaccgttaccatcccgctctttgtgctc
aaccaggtgagcgaagagcgctgcgaatggctggtgcccggcatgctgaaggacaagatc
caggccctgctcaaaagcctgccccagcgcccgcgcagccgctttgtgccgctgcccgaa
tctgccacgcgcctggccgagctgctgggtgcgcccgagcgctttggcacgggcagcctg
accgatgtgttgctcaagcaggtgcgcgacgaaacctcgctggacgtgaagcgcgccgac
ttcaagctcgacatgctcagcccacatctgtatcagcgcgctggtgctgtccgtgtacat
cgcctgctatgccgtgcgttcggtgtggatctcctacatcacccatga
DBGET
integrated database retrieval system
