Acidovorax sp. KKS102: C380_13925
Help
Entry
C380_13925 CDS
T02290
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
ack
Acidovorax sp. KKS102
Brite
KEGG Orthology (KO) [BR:
ack00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
C380_13925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
CENPH
SerH
Cas3-like_C_2
APG6_N
Motif
Other DBs
NCBI-ProteinID:
AFU46484
UniProt:
K0I5K2
LinkDB
All DBs
Position
complement(3044709..3051098)
Genome browser
AA seq
2129 aa
AA seq
DB search
MLPSLLANDIQTALKQFLVSAFEPADAFNHGLMSRFVDDEAAWLKGPFVQVGLPFVAGKC
GKTFFDTFETAHPGFSHQEHAWERLSSHRQGVSTLVATGTGSGKTECFLYPVLDHCARAR
AAGESGVKALVIYPMNALATDQARRIAELVASTAAFAGLRVGLYVGGNAGAPGEGMVMTQ
GAVITDRDTLRKHPPDILLTNYKMLDYLMLRPKDRQLWAANLPTTLRYVVVDELHTFDGA
QGTDLALLLRRLRARLKTPPGHLICAGTSATLGNAADTAPLREYARQIFGVPFGEEAVVT
ESRQSVGRFLEDATVDYMFLFRAEQAPLLEPSQYPTPQAAVQAWFSLFFPDEPVPEDVNA
PAWRRGLGQLLKRHQLFVNLLKLAKGGVVSYPELTEAFARNMPVASPAQVTQVLDALLVL
VAWALRDGSQPLVTLRLQLWVRELRRMVGKLSVNPQEVKLRSERDLPVARDGVYLPMVQC
SQCRTTGWLSRLVQGTSKLSTQLDEVYNTWFSRRPEAARLYASESISRSHVDGVTERVCV
ACGTTQQSQEECLACGHQELLSVFRVTAQKTQVIGQAQYTRHDNTCPACGEQDELLLLGA
RSATLGSQVVESSWASVFNDDKKLIAFSDSVQDAAHRAGFFGARTYLNNVRTALAHVMDE
VVPSRLSWAAFLEKMEQQFEQPGSVLHMSRESLVSEFVAPNMMWQRDWSVELQEKQHLPT
ESRLPLKVKKRLLWQAYSEMTYQSHRGRTLERTGKATLSVPWSVVEAVAADLLPRYREQF
GAHGLELKTVTQWLWGTLAHMRRRGGVMHPELGAYAGDGRVYALVKTGSSAEWMPKMGEH
TPRPVLLTLGTQPGFDKLTGSRRATWYDRWAAAVLVDQTMLVKGLAAEMYREALLAFKDA
GILQLTAHHQGETWAIKPEALELDTEVAFVATAGSKRRLAVPRQDAAHLLGMACIDAPES
RYEVLIAQPDDWWARRFSKGDLRRVIAAEHTGLLERPVREALESRFKSKQPKPWFENLLS
ATPTLEMGVDIGDLSSVLLCSVPPNQASFLQRVGRAGRRDGNALATTLADGNSPHDLYFF
AETQEMLSGEVAPPGVFLQAAEVLRRQLFAFCMDDWVASLNNISALPDKTSQALDAMDQG
KQERFPYVFSNYVLAHEERLFQGFVQLLAGDIDDVVTARLWDFMQGQGESDGLRTRLLKA
LEELQEERRTYKKRKDELDKVRAKAQQKPQDDATRAEIDNLLRERDKLLELIKEINTRDL
LNTLTDAGLIPNYAFPEAGVELKSVLWRKRASDEPGQGAYVTLTTQKYERPAQSALSEFA
PENRFYANQRRVEVDQINMNLAKTEDWRFCPSCHHMQNLTVEADTHVACPSCGDAMWSDA
AQRRTLLRFKQAIANSNDTDVRIDDSADDREPKYYVRQLMADFSPSHIREAWQIGSGALP
FGFEFISRVTFRDVNFGELAKPGEAFKVADKESSRPGFKLCKHCGKVQKPPRRSSDPSGQ
SHSFDCPKYGDDSPTNLLECLYLYREFESEALRILVPYTKNGMDESVVQSFMAAVQLGLK
RRFGGKVDHLRMVLQDEPGKDGGPRRHYVMLYDSVPGGTGYLHQLLAHDAGTLSDVLKMA
LQAVTSCSCNDDPEKDGCYRCLYQYRLGRSMEQVSRDQAKAVLGELVGALDQLERVKTIS
EIFINPNFDSVLEARFIESLKRLGGVGSIPMVKLVQDVVNGKSGFVLEVGGQRYRVEPQC
DVGAEQGVLAASKPDFVIWPWATGSKRRPVAVFCDGWAYHKDCLREDALKRSALVASGRF
WCWSVTHNDVMDALAGKLDTDLESPLMGMARHHGAKAPATVPRAQEKAFTQHAVASLLHW
LATPADGPSGDPAIEQLQRNALWLGFLMVPHNEQEKSTCEHQLGQWIHRLPAHVKEPGKG
FAHSLSKVSGVCQQVGWWPLAAAKGLPQEANWMAPGVLVLDEVKAEDDAALHLAWRQWLQ
LFNTAQSLPGMWLVTASGLDQHDYDGLTSLPAPVAAQASEQTSLNGAWLEVLEQLLEPLK
PGMVRLAQAGAAVPEIGPELADDKGRVVADAEMVWAAAHVAILRPDQADMVQEWTAQGWT
VLCLDEDLTHCNAQPWEKAAATALGLTIE
NT seq
6390 nt
NT seq
+upstream
nt +downstream
nt
atgctcccgtcactactcgccaacgacatacaaacggctctgaaacagtttctggtttct
gccttcgagcccgccgacgcgttcaaccacggtttgatgagccgctttgtcgatgacgag
gcggcgtggcttaaaggcccgtttgtgcaggtgggcctgccatttgtggcgggcaaatgt
ggcaagacgttctttgacacgttcgagaccgcgcaccctggtttcagccaccaagaacac
gcctgggagcggctgtctagtcaccgccagggcgtgagcactttggtggccactggtacg
ggcagcggtaagacagagtgctttctgtacccggtgctggaccactgcgcccgcgcccgc
gcggcgggcgaatctggcgtgaaggccttggtcatctaccccatgaatgcactggccacc
gaccaggcgcgccgcattgccgagctggtggcgtccaccgctgcgtttgccgggttgcgc
gtggggctgtatgtgggcggaaacgccggggctcctggcgagggcatggtaatgacgcag
ggcgccgtcatcactgaccgcgacaccctgcgcaagcacccgcccgacatcttgctgacc
aactacaagatgctcgactacctgatgctgcggcccaaggaccgtcagttatgggccgcc
aacctacccaccacgctgcgctatgtggtggtggacgagttgcacacgtttgatggtgcc
cagggcactgacctagccttgctgctgcgccgcttacgcgcaagactcaaaactccccca
gggcacctcatctgtgcaggcacatcggccaccttgggcaacgccgcagacacggcgcct
ttgcgcgaatatgcgcggcagatttttggtgtgccgtttggcgaagaggctgtggtgacc
gagagccgccaatcggtggggcggtttctggaagacgccacggtggactacatgttcttg
ttccgggcagaacaggcgccgctgctggagccatcgcagtaccccactccgcaggctgcg
gtgcaggcttggttttcgctgtttttcccggacgagccagtgccagaggacgtcaacgca
cctgcgtggcgccgtgggctgggccagttgctcaagcgccaccagcttttcgtgaacctg
ctcaagctggccaagggtggagtggtgagctacccagagctgacagaagcctttgcacgc
aacatgcctgtggccagcccggcgcaggtcactcaggtactcgatgccctgttggtattg
gtggcctgggcgctgcgcgacgggtcgcagcccttggtcacgctacggctgcagctgtgg
gtgcgtgagttgcgccgcatggtgggcaagctcagcgttaacccacaggaagtgaaattg
cgcagtgagcgtgacctgccggtggcgcgcgatggtgtctacctgcccatggtgcagtgc
agccagtgccgcaccactggatggctgtcccgattggtgcagggcaccagcaaactctcg
acccagctcgatgaggtctacaacacctggttttcgcggcgtcccgaggcggcacggctg
tatgcatcagagagcatttcgcgctcgcatgtcgatggcgtgaccgagcgcgtctgcgta
gcctgcggaaccacgcagcaaagccaggaagagtgcctggcttgcggccatcaagagttg
ttgtcggtgtttcgtgtcacagcccagaagacgcaggtgataggtcaggcgcagtacacg
cggcacgacaacacctgtccagcttgcggcgagcaagacgagctcttgctgctgggtgcg
cgcagcgccacgctgggctcgcaagtggtagagagcagttgggccagtgtgttcaacgac
gacaagaagctgattgcgttttcagactcggttcaagacgccgcccaccgtgcgggcttc
tttggcgcgcgtacgtaccttaacaacgtgcgcacggcgctggcccatgtgatggacgag
gtggtgccctcgcgtttgagctgggccgcgttcctcgaaaagatggagcagcagttcgag
caaccaggttcggtgttgcacatgtctcgcgaatcgctggtgtcagagtttgtagcgccg
aacatgatgtggcagcgcgattggtcggtggaactgcaagagaagcagcatctgcccact
gagagccggctgccgctgaaggttaagaagcggctgctctggcaggcttacagtgagatg
acctaccaaagccaccgcgggcgaaccttggagcgcacgggcaaggccacgctatctgtg
ccttggagcgtggtggaggcggtggctgccgacttgctgccgcgctatcgcgaacagttt
ggcgcccatgggctcgaactgaagacggtgacccaatggctgtggggcaccctggcgcac
atgcgcagacgcggtggggtgatgcaccccgagctcggtgcctacgctggggacggcaga
gtctatgccctggtcaaaaccgggagcagcgcggaatggatgcccaagatgggagagcac
acaccgcgaccggtgctcctgaccctgggcacgcagcctggctttgacaaattgaccggc
agtaggcgcgccacctggtacgaccgatgggccgctgccgtgttggtcgaccagaccatg
ctggtcaagggcctggcagccgagatgtaccgagaggctttgctggcctttaaagatgcg
ggcattctgcagctgacggcccaccaccagggcgagacctgggccatcaaacccgaggcg
ctggagctcgataccgaggtggccttcgtggccactgctggcagcaagcgcaggctggca
gtgccccggcaagatgcagcgcacctgctgggcatggcctgtattgatgcgccggagtct
cgttacgaagtcctcattgcgcagccggacgattggtgggcccggcgctttagcaaaggc
gacttgcggcgcgttattgccgccgagcacacggggttgctggagcggcctgtgcgagaa
gcccttgagagccgcttcaagtcaaagcagcccaaaccttggtttgagaatctgctctcc
gcgacgcccacgctggaaatgggtgtggacattggcgatttgtcttcggtattgctgtgc
tctgtgccacccaaccaagccagctttttgcagcgggtaggccgcgcggggcgccgtgac
ggcaacgcccttgctaccacgctagcagatggcaacagcccccatgacctgtactttttc
gctgaaacccaggagatgctgtcgggtgaggtggcgccacccggggtgttcttgcaggcg
gccgaggtgctgcgtcggcaattgttcgcattttgcatggacgactgggtggccagcctg
aacaacatttcagcgttgcccgacaagacctcgcaggcgcttgacgccatggaccagggc
aagcaggagcgcttcccctatgtattcagcaactacgtgctggcgcatgaggagcgattg
tttcagggctttgtgcaattgctggcgggtgatattgacgatgtggtcacagcgaggctg
tgggacttcatgcaggggcaaggtgagtcggacggcctgcgcactcgtttgctgaaggcc
ctggaggaactgcaggaggagcgacgtacctacaaaaagcgcaaggatgagctcgataag
gtgcgcgcaaaggcacagcaaaagccccaggacgatgcgacgcgcgccgaaatcgacaac
ctgctgcgtgagcgggacaagttgctggagctgattaaagaaatcaacacgcgtgacttg
ctgaacacgctgaccgatgcggggctgattcccaactacgccttcccggaggccggcgtg
gagctcaagtctgttttgtggcgcaagcgggcctcggacgagccaggccaaggcgcctat
gtcacgctgaccacgcagaagtacgaacgcccggcgcaatctgccctctcggagtttgcg
cccgagaaccgcttctatgccaaccagcggcgcgtggaggtggaccaaatcaacatgaat
ttggcaaaaacggaagactggcgtttctgcccgtcttgccatcacatgcagaacttgacg
gtagaggcagacacccatgtagcgtgcccttcgtgcggcgatgcgatgtggtcggatgcg
gcacaacgccgtacgctgctgcgcttcaaacaagccattgccaatagcaacgacacggat
gtgcgcatcgacgacagtgccgatgaccgcgaacccaagtattacgtgcgccagctgatg
gcggatttctctccatcacatattcgtgaggcgtggcagattggctcgggtgctctgccg
tttggttttgagttcatctcccgggtgacgttccgggacgtgaattttggtgagctggcc
aagcctggcgaggcgttcaaggtggcggacaaggagtcttcgcgacctggattcaagctg
tgcaagcactgcggcaaggtgcaaaagcctcctcgacgaagtagcgacccgagcgggcaa
agccatagcttcgattgccccaagtacggggatgacagtcctaccaacttgctggagtgc
ctgtacctgtaccgagagttcgagtcggaggctttgcggattctggtgccgtatacgaag
aacggcatggacgagagcgtggtccagtccttcatggcggccgtgcagttggggctcaag
cgccgatttggtggcaaggtggaccacttgcgcatggtgctgcaggacgagcctggcaaa
gacggtgggccgcgccgccattacgtcatgctgtacgactcggtgcccggcggcacaggc
tatctgcaccagttgctggctcatgatgcgggcaccttgtcagatgtgctcaagatggcg
ctgcaggcggtcaccagttgctcttgtaacgatgacccggaaaaggatggctgctatcgc
tgcctgtaccagtaccgactggggcgcagtatggagcaggtctccagagaccaagccaag
gcggtgctgggtgaactggtgggggcgctggaccagctggagcgggtcaagacgatttcc
gagatttttatcaatccgaacttcgactcggtcctagaggcgcggtttatcgagtcgttg
aagcgcctcggtggtgttggctccatacctatggtgaagctggtgcaggacgtagtgaac
gggaagtccggctttgtgttggaagtgggtgggcagcggtatcgagtagagccgcagtgc
gatgtgggcgctgagcaaggggtactcgcagccagcaaacctgattttgtgatttggcct
tgggcaacaggctccaaacgccgccccgttgccgttttttgcgacggctgggcttatcac
aaggactgtctgcgtgaggatgcgttgaagcgtagcgcattggtggccagcggcaggttc
tggtgctggtctgttacgcacaacgatgtgatggatgctcttgctgggaaattggatacc
gacctggagtcgccgttgatgggcatggcccgccatcacggggccaaggccccagcaacg
gttccacgcgcgcaggagaaggccttcacgcagcatgcggtcgccagcttgttgcattgg
cttgccaccccggcggatggaccctccggcgaccctgcaatcgagcagttgcagcgcaac
gccttgtggttgggctttttgatggtgccgcataacgaacaggagaaatcgacttgcgag
catcagctcgggcaatggattcaccgactgcctgcgcacgtcaaggaaccgggcaaaggt
tttgcgcacagcctctccaaggtgtcgggggtatgtcagcaagttggatggtggcctttg
gctgccgccaagggacttccacaggaagcaaactggatggcgcctggcgtcctggttctg
gacgaggtgaaggctgaagatgacgctgcgcttcacttggcttggcgccagtggctgcaa
ttgttcaatacggcccagtcgctgccaggtatgtggcttgtcaccgccagcggactggac
cagcacgattacgacggcctgacctccttgcccgcacccgtggccgcgcaggcgtctgag
caaacctctttgaacggcgcgtggttggaggtccttgagcagcttttggagcctctcaag
ccaggtatggttcggttggcgcaggccggagcggctgtgcccgaaatcggccccgaactg
gcagatgacaaaggccgtgttgtggccgacgccgagatggtttgggcagctgcccatgta
gcgattcttcgaccggaccaggcagatatggtgcaggagtggaccgcgcaagggtggaca
gtgctgtgtctggatgaggacctgacacattgcaatgcgcagccttgggagaaggctgct
gcaacggcgttgggtctgaccatcgaataa
DBGET
integrated database retrieval system
